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  5. AT3G55970

AT3G55970 (ATJRG21, JRG21)


Aliases : ATJRG21, JRG21

Description : jasmonate-regulated gene 21


Gene families : OG0000036 (Archaeplastida) Phylogenetic Tree(s): OG0000036_tree ,
OG_05_0000708 (LandPlants) Phylogenetic Tree(s): OG_05_0000708_tree ,
OG_06_0000888 (SeedPlants) Phylogenetic Tree(s): OG_06_0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55970
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00254520 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.05 Archaeplastida
AMTR_s00033p00193860 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.06 Archaeplastida
AMTR_s00062p00064770 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 Archaeplastida
AT3G11180 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.06 Archaeplastida
AT3G21420 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.04 Archaeplastida
AT3G47190 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.04 Archaeplastida
AT4G21200 ATGA2OX8, GA2OX8 gibberellin 2-oxidase 8 0.03 Archaeplastida
AT4G25300 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.05 Archaeplastida
AT4G25310 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.04 Archaeplastida
AT5G20550 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.07 Archaeplastida
GSVIVT01012845001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01013255001 No alias S-norcoclaurine synthase 1 OS=Coptis japonica 0.06 Archaeplastida
GSVIVT01017737001 No alias Phytohormones.strigolactone.synthesis.LBO oxidoreductase 0.03 Archaeplastida
GSVIVT01018336001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01018667001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018669001 No alias Codeine O-demethylase OS=Papaver somniferum 0.03 Archaeplastida
GSVIVT01021328001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01021330001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021339001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021349001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01031814001 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.02 Archaeplastida
GSVIVT01031815001 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.04 Archaeplastida
GSVIVT01031818001 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.04 Archaeplastida
GSVIVT01031820001 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.04 Archaeplastida
GSVIVT01031827001 No alias Protein DOWNY MILDEW RESISTANCE 6 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031830001 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.07 Archaeplastida
GSVIVT01031837001 No alias Protein DMR6-LIKE OXYGENASE 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_01811 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.04 Archaeplastida
Gb_19770 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_27202 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.03 Archaeplastida
Gb_28766 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_32328 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
LOC_Os01g61610.2 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.02 Archaeplastida
LOC_Os02g41954.1 No alias no description available(sp|q7xp65|g2ox6_orysj : 415.0)... 0.03 Archaeplastida
LOC_Os03g18030.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.04 Archaeplastida
LOC_Os03g63900.1 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.04 Archaeplastida
LOC_Os04g33360.1 No alias Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os07g01340.1 No alias no description available(sp|q8lgz9|g2ox5_orysj : 712.0)... 0.04 Archaeplastida
LOC_Os08g15149.1 No alias Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g40900.1 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.04 Archaeplastida
LOC_Os10g41020.1 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.04 Archaeplastida
LOC_Os11g25060.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
MA_10426390g0020 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 Archaeplastida
MA_10427811g0010 No alias oxidoreductase (LBO) 0.04 Archaeplastida
MA_10430508g0020 No alias Probable 2-oxoglutarate-dependent dioxygenase JRG21... 0.03 Archaeplastida
MA_160618g0010 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.02 Archaeplastida
MA_27191g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.05 Archaeplastida
MA_357183g0010 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_70464g0010 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_77600g0010 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.04 Archaeplastida
MA_8668831g0010 No alias Probable 2-oxoglutarate-dependent dioxygenase JRG21... 0.03 Archaeplastida
MA_9128005g0010 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
MA_9992472g0010 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp4g04680.1 No alias Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c25_4690V3.1 No alias gibberellin 20-oxidase 3 0.02 Archaeplastida
Solyc01g108880.4.1 No alias Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc02g071360.4.1 No alias No annotation 0.03 Archaeplastida
Solyc02g071430.3.1 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc03g096050.3.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.08 Archaeplastida
Solyc10g076660.2.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.05 Archaeplastida
Solyc10g076670.3.1 No alias Probable 2-oxoglutarate-dependent dioxygenase JRG21... 0.05 Archaeplastida
Solyc10g085190.2.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.04 Archaeplastida
Zm00001e001310_P002 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.06 Archaeplastida
Zm00001e001718_P001 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e002816_P002 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e011628_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019390_P001 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.02 Archaeplastida
Zm00001e028806_P001 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.05 Archaeplastida
Zm00001e029477_P001 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.04 Archaeplastida
Zm00001e038422_P001 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0043090 amino acid import RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004022 alcohol dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004053 arginase activity IEP Neighborhood
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Neighborhood
MF GO:0004121 cystathionine beta-lyase activity IEP Neighborhood
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
BP GO:0006560 proline metabolic process IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006591 ornithine metabolic process IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006690 icosanoid metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008169 C-methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008783 agmatinase activity IEP Neighborhood
BP GO:0009445 putrescine metabolic process IEP Neighborhood
BP GO:0009595 detection of biotic stimulus IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009694 jasmonic acid metabolic process IEP Neighborhood
BP GO:0009695 jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009723 response to ethylene IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009745 sucrose mediated signaling IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
BP GO:0010188 response to microbial phytotoxin IEP Neighborhood
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Neighborhood
MF GO:0010327 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010597 green leaf volatile biosynthetic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0016045 detection of bacterium IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016413 O-acetyltransferase activity IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
BP GO:0019372 lipoxygenase pathway IEP Neighborhood
BP GO:0019430 removal of superoxide radicals IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0023014 signal transduction by protein phosphorylation IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0031348 negative regulation of defense response IEP Neighborhood
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0043069 negative regulation of programmed cell death IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
MF GO:0052624 2-phytyl-1,4-naphthoquinone methyltransferase activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070547 L-tyrosine aminotransferase activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Neighborhood
MF GO:0080031 methyl salicylate esterase activity IEP Neighborhood
MF GO:0080032 methyl jasmonate esterase activity IEP Neighborhood
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP Neighborhood
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP Neighborhood
MF GO:0080131 hydroxyjasmonate sulfotransferase activity IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
MF GO:0080150 S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
BP GO:0098543 detection of other organism IEP Neighborhood
BP GO:0098581 detection of external biotic stimulus IEP Neighborhood
BP GO:0098869 cellular oxidant detoxification IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1990748 cellular detoxification IEP Neighborhood
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 214 312
IPR026992 DIOX_N 52 163
No external refs found!