1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e041403_P001

Zm00001e041403_P001


Description : transcription factor (bHLH)


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0028513 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041403_P001
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.07 Archaeplastida
AMTR_s00015p00239460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G72210 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G46690 bHLH071 beta HLH protein 71 0.03 Archaeplastida
GSVIVT01009097001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01021074001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01027446001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Gb_17233 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.1 Archaeplastida
LOC_Os03g03000.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os04g50090.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os05g50900.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os08g37730.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os09g29360.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
MA_120602g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_194157g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_57244g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_686524g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Smo91359 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc01g080050.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc03g007410.4.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc05g053660.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc09g091760.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e000657_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e009989_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e034422_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 80 131
No external refs found!