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  5. AT3G56060

AT3G56060


Description : Glucose-methanol-choline (GMC) oxidoreductase family protein


Gene families : OG0000176 (Archaeplastida) Phylogenetic Tree(s): OG0000176_tree ,
OG_05_0000864 (LandPlants) Phylogenetic Tree(s): OG_05_0000864_tree ,
OG_06_0000685 (SeedPlants) Phylogenetic Tree(s): OG_06_0000685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G56060
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263600 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00028p00208270 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00036p00060130 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
AMTR_s00069p00163110 evm_27.TU.AmTr_v1... Protein HOTHEAD OS=Arabidopsis thaliana 0.07 Archaeplastida
AT1G12570 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Archaeplastida
AT5G51950 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.06 Archaeplastida
GSVIVT01010648001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01010650001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01016856001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.04 Archaeplastida
GSVIVT01019871001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_00808 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_00812 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_16610 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_19558 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_27931 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28422 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_29960 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.08 Archaeplastida
Gb_31766 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_32365 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_33524 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_37786 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_39927 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_39928 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_41784 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g45530.1 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g31030.1 No alias omega-hydroxy fatty acyl dehydrogenase 0.03 Archaeplastida
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10434331g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_115358g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.05 Archaeplastida
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.06 Archaeplastida
Smo405960 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo427468 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.07 Archaeplastida
Smo90809 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc08g080190.4.1 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e004200_P002 No alias omega-hydroxy fatty acyl dehydrogenase 0.06 Archaeplastida
Zm00001e015434_P001 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e030422_P001 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e033949_P001 No alias omega-hydroxy fatty acyl dehydrogenase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016832 aldehyde-lyase activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009566 fertilization IEP Neighborhood
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0009646 response to absence of light IEP Neighborhood
MF GO:0009922 fatty acid elongase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0031210 phosphatidylcholine binding IEP Neighborhood
BP GO:0031537 regulation of anthocyanin metabolic process IEP Neighborhood
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050829 defense response to Gram-negative bacterium IEP Neighborhood
MF GO:0050997 quaternary ammonium group binding IEP Neighborhood
MF GO:0070405 ammonium ion binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1902446 regulation of shade avoidance IEP Neighborhood
BP GO:1902448 positive regulation of shade avoidance IEP Neighborhood
BP GO:2000030 regulation of response to red or far red light IEP Neighborhood
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 412 557
IPR000172 GMC_OxRdtase_N 46 322
No external refs found!