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  5. AT3G56470

AT3G56470


Description : F-box family protein


Gene families : OG0008112 (Archaeplastida) Phylogenetic Tree(s): OG0008112_tree ,
OG_05_0006716 (LandPlants) Phylogenetic Tree(s): OG_05_0006716_tree ,
OG_06_0003933 (SeedPlants) Phylogenetic Tree(s): OG_06_0003933_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G56470
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT3G18720 No alias F-box family protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004140 dephospho-CoA kinase activity IEP Neighborhood
MF GO:0004656 procollagen-proline 4-dioxygenase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0004661 protein geranylgeranyltransferase activity IEP Neighborhood
MF GO:0004662 CAAX-protein geranylgeranyltransferase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0004846 urate oxidase activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
CC GO:0005942 phosphatidylinositol 3-kinase complex IEP Neighborhood
CC GO:0005953 CAAX-protein geranylgeranyltransferase complex IEP Neighborhood
BP GO:0006144 purine nucleobase metabolic process IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0008970 phospholipase A1 activity IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010219 regulation of vernalization response IEP Neighborhood
BP GO:0010220 positive regulation of vernalization response IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
BP GO:0016236 macroautophagy IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016663 oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor IEP Neighborhood
BP GO:0018126 protein hydroxylation IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
BP GO:0018344 protein geranylgeranylation IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Neighborhood
BP GO:0019471 4-hydroxyproline metabolic process IEP Neighborhood
BP GO:0019511 peptidyl-proline hydroxylation IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019798 procollagen-proline dioxygenase activity IEP Neighborhood
BP GO:0030308 negative regulation of cell growth IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
MF GO:0031543 peptidyl-proline dioxygenase activity IEP Neighborhood
MF GO:0031545 peptidyl-proline 4-dioxygenase activity IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
CC GO:0035032 phosphatidylinositol 3-kinase complex, class III IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0047714 galactolipase activity IEP Neighborhood
BP GO:0048571 long-day photoperiodism IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
CC GO:0070772 PAS complex IEP Neighborhood
BP GO:0071470 cellular response to osmotic stress IEP Neighborhood
BP GO:0071472 cellular response to salt stress IEP Neighborhood
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP Neighborhood
BP GO:0080091 regulation of raffinose metabolic process IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1900088 regulation of inositol biosynthetic process IEP Neighborhood
BP GO:1900091 regulation of raffinose biosynthetic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901420 negative regulation of response to alcohol IEP Neighborhood
MF GO:1901981 phosphatidylinositol phosphate binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902930 regulation of alcohol biosynthetic process IEP Neighborhood
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Neighborhood
BP GO:1905958 negative regulation of cellular response to alcohol IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 28 68
No external refs found!