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  5. Zm00001e042073_P001

Zm00001e042073_P001


Description : no hits & (original description: none)


Gene families : OG0002098 (Archaeplastida) Phylogenetic Tree(s): OG0002098_tree ,
OG_05_0001646 (LandPlants) Phylogenetic Tree(s): OG_05_0001646_tree ,
OG_06_0001309 (SeedPlants) Phylogenetic Tree(s): OG_06_0001309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042073_P001
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00108730 evm_27.TU.AmTr_v1... 30S ribosomal protein S2, chloroplastic OS=Amborella trichopoda 0.03 Archaeplastida
ATCG00160 RPS2 ribosomal protein S2 0.09 Archaeplastida
LOC_Os02g24612.1 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida
LOC_Os10g21234.1 No alias component psRPS2 of small ribosomal subunit proteome 0.01 Archaeplastida
LOC_Os10g38278.1 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida
Mp3g24030.1 No alias 30S ribosomal protein S2, chloroplastic OS=Marchantia... 0.05 Archaeplastida
Mp8g10410.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo137779 No alias Protein biosynthesis.organelle translation... 0.03 Archaeplastida
Solyc00g500051.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.01 Archaeplastida
Solyc00g500134.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.07 Archaeplastida
Solyc00g500204.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.07 Archaeplastida
Solyc00g500291.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.07 Archaeplastida
Solyc00g500320.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.07 Archaeplastida
Solyc09g018555.1.1 No alias 30S ribosomal protein S2, chloroplastic OS=Nicotiana... 0.04 Archaeplastida
Solyc12g062630.1.1 No alias 30S ribosomal protein S2, chloroplastic OS=Solanum... 0.05 Archaeplastida
Zm00001e042442_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!