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  5. AT3G56820

AT3G56820


Description : unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).


Gene families : OG0008873 (Archaeplastida) Phylogenetic Tree(s): OG0008873_tree ,
OG_05_0009738 (LandPlants) Phylogenetic Tree(s): OG_05_0009738_tree ,
OG_06_0007378 (SeedPlants) Phylogenetic Tree(s): OG_06_0007378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G56820
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00110450 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005093 Rab GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
BP GO:0007143 female meiotic nuclear division IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008156 negative regulation of DNA replication IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0010082 regulation of root meristem growth IEP Neighborhood
BP GO:0010165 response to X-ray IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0010948 negative regulation of cell cycle process IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015864 pyrimidine nucleoside transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
BP GO:0016925 protein sumoylation IEP Neighborhood
MF GO:0017137 Rab GTPase binding IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
MF GO:0019789 SUMO transferase activity IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0022622 root system development IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Neighborhood
CC GO:0031307 integral component of mitochondrial outer membrane IEP Neighborhood
BP GO:0031401 positive regulation of protein modification process IEP Neighborhood
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Neighborhood
CC GO:0032592 integral component of mitochondrial membrane IEP Neighborhood
BP GO:0032875 regulation of DNA endoreduplication IEP Neighborhood
BP GO:0032876 negative regulation of DNA endoreduplication IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0045787 positive regulation of cell cycle IEP Neighborhood
BP GO:0045931 positive regulation of mitotic cell cycle IEP Neighborhood
MF GO:0047617 acyl-CoA hydrolase activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051053 negative regulation of DNA metabolic process IEP Neighborhood
BP GO:0060250 germ-line stem-cell niche homeostasis IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0080038 positive regulation of cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Neighborhood
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:2000539 regulation of protein geranylgeranylation IEP Neighborhood
BP GO:2000541 positive regulation of protein geranylgeranylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!