Zm00001e042237_P001

Description : large subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer

Gene families : OG0001030 (Archaeplastida) Phylogenetic Tree(s): OG0001030_tree ,
OG_05_0000707 (LandPlants) Phylogenetic Tree(s): OG_05_0000707_tree ,
OG_06_0000483 (SeedPlants) Phylogenetic Tree(s): OG_06_0000483_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e042237_P001
Cluster	HCCA: Cluster_133

Target	Alias	Description	ECC score	Gene Family Method
MA_103636g0010	No alias	Ribulose bisphosphate carboxylase large chain...	0.01	Archaeplastida
Smo137874	No alias	Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat...	0.03	Archaeplastida
Solyc00g500063.1.1	No alias	large subunit of ribulose-1,5-bisphosphat...	0.03	Archaeplastida
Solyc07g021200.1.1	No alias	Ribulose bisphosphate carboxylase large chain (Fragment)...	0.03	Archaeplastida
Zm00001e036792_P001	No alias	Ribulose bisphosphate carboxylase large chain OS=Zea...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0015977	carbon fixation	IEA	Interproscan
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
MF	GO:0016984	ribulose-bisphosphate carboxylase activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR017443	RuBisCO_lsu_fd_N	31	151
IPR000685	RuBisCO_lsu_C	161	329

External Links

No external refs found!