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  5. Zm00001e042518_P001

Zm00001e042518_P001


Description : no hits & (original description: none)


Gene families : OG0000535 (Archaeplastida) Phylogenetic Tree(s): OG0000535_tree ,
OG_05_0000281 (LandPlants) Phylogenetic Tree(s): OG_05_0000281_tree ,
OG_06_0000124 (SeedPlants) Phylogenetic Tree(s): OG_06_0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042518_P001
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270640 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AT1G02790 PGA4 polygalacturonase 4 0.05 Archaeplastida
GSVIVT01030023001 No alias Polygalacturonase OS=Gossypium hirsutum 0.03 Archaeplastida
GSVIVT01035103001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia 0.02 Archaeplastida
LOC_Os06g35300.1 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.02 Archaeplastida
LOC_Os06g35370.1 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!