1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp1g00710.1

Mp1g00710.1


Description : DNA repair protein (CEN2). centrin component CEN of TREX-2 mRNP trafficking complex


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0002452 (LandPlants) Phylogenetic Tree(s): OG_05_0002452_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g00710.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT3G56800 CAM3, acam-3 calmodulin 3 0.01 Archaeplastida
Cpa|evm.model.tig00021435.46 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00021435.47 No alias Calmodulin OS=Mougeotia scalaris 0.01 Archaeplastida
Cpa|evm.model.tig00021720.13 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
Gb_20553 No alias Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 248.0) 0.02 Archaeplastida
Gb_37768 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
MA_269415g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_335961g0010 No alias Probable calcium-binding protein CML13 OS=Arabidopsis... 0.02 Archaeplastida
MA_8749g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Pp3c2_12100V3.1 No alias centrin 2 0.04 Archaeplastida
Pp3c4_1800V3.1 No alias centrin2 0.03 Archaeplastida
Pp3c9_25180V3.1 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
Zm00001e024051_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e031053_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
CC GO:0005815 microtubule organizing center IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
BP GO:0034453 microtubule anchoring IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 102 166
IPR002048 EF_hand_dom 30 92
No external refs found!