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  5. Mp1g05140.1

Mp1g05140.1


Description : component MED23 of tail module of MEDIATOR transcription co-activator complex


Gene families : OG0006926 (Archaeplastida) Phylogenetic Tree(s): OG0006926_tree ,
OG_05_0005266 (LandPlants) Phylogenetic Tree(s): OG_05_0005266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g05140.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00196600 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
AT1G23230 No alias CONTAINS InterPro DOMAIN/s: Mediator complex subunit... 0.02 Archaeplastida
GSVIVT01011680001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Gb_41520 No alias component MED23 of tail module of MEDIATOR transcription... 0.04 Archaeplastida
LOC_Os02g49992.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.05 Archaeplastida
MA_10281498g0010 No alias component MED23 of tail module of MEDIATOR transcription... 0.02 Archaeplastida
Smo76173 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Solyc05g016440.3.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 Archaeplastida
Solyc05g016460.2.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.02 Archaeplastida
Zm00001e015737_P001 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009143 nucleoside triphosphate catabolic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR021629 Mediator_Med23 688 1228
No external refs found!