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  5. Mp1g06900.1

Mp1g06900.1


Description : FRIGIDA-like protein 3 OS=Arabidopsis thaliana (sp|q67zb3|frl3_arath : 257.0)


Gene families : OG0002662 (Archaeplastida) Phylogenetic Tree(s): OG0002662_tree ,
OG_05_0001856 (LandPlants) Phylogenetic Tree(s): OG_05_0001856_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g06900.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01001527001 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01037774001 No alias FRIGIDA-like protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_40916 No alias FRIGIDA-like protein 4a OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10430352g0010 No alias FRIGIDA-like protein 4b OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10436820g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_105292g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g007640.3.1 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e009308_P001 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e033632_P002 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e035443_P001 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005548 phospholipid transporter activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015914 phospholipid transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043044 ATP-dependent chromatin remodeling IEP Neighborhood
BP GO:0043486 histone exchange IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Neighborhood
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Neighborhood
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR012474 Frigida 225 524
No external refs found!