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  5. Mp1g09020.1

Mp1g09020.1


Description : histone (H2A)


Gene families : OG0001575 (Archaeplastida) Phylogenetic Tree(s): OG0001575_tree ,
OG_05_0001718 (LandPlants) Phylogenetic Tree(s): OG_05_0001718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g09020.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT3G54560 HTA11 histone H2A 11 0.04 Archaeplastida
Cre13.g567700 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
GSVIVT01003139001 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Gb_04984 No alias histone (H2A) 0.09 Archaeplastida
LOC_Os03g06670.1 No alias histone (H2A) 0.03 Archaeplastida
LOC_Os10g28230.1 No alias histone (H2A) 0.04 Archaeplastida
Pp3c3_27030V3.1 No alias histone H2A protein 9 0.03 Archaeplastida
Solyc06g084090.4.1 No alias histone (H2A) 0.04 Archaeplastida
Zm00001e005636_P001 No alias histone (H2A) 0.05 Archaeplastida
Zm00001e012057_P001 No alias histone (H2A) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 110 140
IPR007125 Histone_H2A/H2B/H3 26 109
No external refs found!