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Description : HCF152 plastidial RNA transcript stability factor
Gene families : OG0001060 (Archaeplastida) Phylogenetic Tree(s): OG0001060_tree ,
OG_05_0004955 (LandPlants) Phylogenetic Tree(s): OG_05_0004955_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g13160.1 | |
| Cluster | HCCA: Cluster_180 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Neighborhood |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Neighborhood |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
| BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009235 | cobalamin metabolic process | IEP | Neighborhood |
| BP | GO:0009236 | cobalamin biosynthetic process | IEP | Neighborhood |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
| BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 588 | 635 |
| IPR002885 | Pentatricopeptide_repeat | 385 | 432 |
| IPR002885 | Pentatricopeptide_repeat | 694 | 741 |
| IPR002885 | Pentatricopeptide_repeat | 646 | 688 |
| IPR002885 | Pentatricopeptide_repeat | 512 | 543 |
| IPR002885 | Pentatricopeptide_repeat | 555 | 580 |
| IPR002885 | Pentatricopeptide_repeat | 780 | 806 |
| No external refs found! |