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  5. Mp1g16770.1

Mp1g16770.1


Description : component alpha type-3 of 26S proteasome


Gene families : OG0003320 (Archaeplastida) Phylogenetic Tree(s): OG0003320_tree ,
OG_05_0004054 (LandPlants) Phylogenetic Tree(s): OG_05_0004054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g16770.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00168180 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.06 Archaeplastida
AT3G22110 PAC1 20S proteasome alpha subunit C1 0.03 Archaeplastida
Cpa|evm.model.tig00020965.21 No alias Protein degradation.26S proteasome.20S core... 0.06 Archaeplastida
Cre10.g418100 No alias Protein degradation.26S proteasome.20S core... 0.17 Archaeplastida
Gb_31719 No alias component alpha type-3 of 26S proteasome 0.01 Archaeplastida
LOC_Os06g07140.1 No alias component alpha type-3 of 26S proteasome 0.03 Archaeplastida
MA_474079g0010 No alias component alpha type-3 of 26S proteasome 0.02 Archaeplastida
Pp3c12_12990V3.1 No alias 20S proteasome alpha subunit C1 0.02 Archaeplastida
Pp3c3_28170V3.1 No alias 20S proteasome alpha subunit C1 0.03 Archaeplastida
Pp3c4_9140V3.1 No alias 20S proteasome alpha subunit C1 0.02 Archaeplastida
Solyc02g081700.1.1 No alias component alpha type-3 of 26S proteasome 0.12 Archaeplastida
Zm00001e030110_P001 No alias component alpha type-3 of 26S proteasome 0.05 Archaeplastida
Zm00001e036395_P002 No alias component alpha type-3 of 26S proteasome 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 29 214
IPR000426 Proteasome_asu_N 5 27
No external refs found!