Mp1g18780.1

Description : RNA chaperone (RZ1|GR-RBP)

Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0000481 (LandPlants) Phylogenetic Tree(s): OG_05_0000481_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp1g18780.1
Cluster	HCCA: Cluster_136

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os04g33810.1	No alias	Small RNA-binding protein 11, chloroplastic...	0.01	Archaeplastida
LOC_Os04g49440.3	No alias	Organelle RRM domain-containing protein 6, chloroplastic...	0.02	Archaeplastida
LOC_Os12g43600.1	No alias	RNA chaperone (RZ1\|GR-RBP)	0.03	Archaeplastida
Solyc06g035610.3.1	No alias	Organelle RRM domain-containing protein 2, mitochondrial...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
CC	GO:0034357	photosynthetic membrane	IEP	Neighborhood
CC	GO:0042651	thylakoid membrane	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	15	83

External Links

No external refs found!