1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G59160

AT3G59160


Description : F-box/RNI-like superfamily protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G59160
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT1G47920 No alias RNI-like superfamily protein 0.09 Archaeplastida
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.07 Archaeplastida
AT2G29930 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.03 Archaeplastida
AT3G44060 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G44080 No alias F-box family protein 0.07 Archaeplastida
AT3G44090 No alias F-box family protein 0.08 Archaeplastida
AT3G44180 No alias syntaxin-related family protein 0.06 Archaeplastida
AT3G58860 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT3G58880 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT3G58920 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT3G58950 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G58960 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT3G59230 No alias RNI-like superfamily protein 0.06 Archaeplastida
AT3G62440 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT4G00320 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT4G27050 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G15620 No alias F-box/RNI-like superfamily protein 0.11 Archaeplastida
AT5G25860 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.06 Archaeplastida
AT5G38396 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G41630 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G41830 No alias RNI-like superfamily protein 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
BP GO:0032957 inositol trisphosphate metabolic process IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP Neighborhood
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048868 pollen tube development IEP Neighborhood
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 15 49
IPR013101 Leu-rich_rpt_2 190 216
No external refs found!