AT3G59580

Description : Plant regulator RWP-RK family protein

Gene families : OG0000715 (Archaeplastida) Phylogenetic Tree(s): OG0000715_tree ,
OG_05_0000574 (LandPlants) Phylogenetic Tree(s): OG_05_0000574_tree ,
OG_06_0005998 (SeedPlants) Phylogenetic Tree(s): OG_06_0005998_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G59580
Cluster	HCCA: Cluster_184

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00009420	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00080p00150020	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AT2G17150	No alias	Plant regulator RWP-RK family protein	0.04	Archaeplastida
AT4G35270	No alias	Plant regulator RWP-RK family protein	0.04	Archaeplastida
GSVIVT01019600001	No alias	External stimuli response.biotic...	0.03	Archaeplastida
Gb_03476	No alias	transcription factor (NLP). NLP6/7 nitrate response...	0.03	Archaeplastida
Solyc08g082750.3.1	No alias	transcription factor (NLP). NLP6/7 nitrate response...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006714	sesquiterpenoid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009687	abscisic acid metabolic process	None	Extended
BP	GO:0009688	abscisic acid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016106	sesquiterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043288	apocarotenoid metabolic process	None	Extended
BP	GO:0043289	apocarotenoid biosynthetic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1902644	tertiary alcohol metabolic process	None	Extended
BP	GO:1902645	tertiary alcohol biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000059	obsolete protein import into nucleus, docking	IEP	Neighborhood
CC	GO:0005643	nuclear pore	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood
MF	GO:0035197	siRNA binding	IEP	Neighborhood
BP	GO:0048446	petal morphogenesis	IEP	Neighborhood
MF	GO:0061980	regulatory RNA binding	IEP	Neighborhood
BP	GO:0080188	RNA-directed DNA methylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003035	RWP-RK_dom	535	583
IPR000270	PB1_dom	793	874

External Links

No external refs found!

AT3G59580

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation