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  5. Mp1g28900.1

Mp1g28900.1


Description : AP-endonuclease (APE2)


Gene families : OG0002347 (Archaeplastida) Phylogenetic Tree(s): OG0002347_tree ,
OG_05_0005577 (LandPlants) Phylogenetic Tree(s): OG_05_0005577_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g28900.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Smo405855 No alias DNA damage response.DNA repair mechanisms.base excision... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003919 FMN adenylyltransferase activity IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR010666 Znf_GRF 593 641
IPR005135 Endo/exonuclease/phosphatase 15 287
No external refs found!