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AT3G60730


Description : Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0025173 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G60730
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00047530 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G49180 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_10522 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_10372207g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_130858g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_2253g0010 No alias pectin methylesterase 0.03 Archaeplastida
Mp8g09330.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c2_35260V3.1 No alias pectin methylesterase 3 0.03 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083840.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e011069_P001 No alias pectin methylesterase 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0009505 plant-type cell wall ISS Interproscan
MF GO:0030599 pectinesterase activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009685 gibberellin metabolic process IEP Neighborhood
BP GO:0009686 gibberellin biosynthetic process IEP Neighborhood
BP GO:0016102 diterpenoid biosynthetic process IEP Neighborhood
MF GO:0016405 CoA-ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016878 acid-thiol ligase activity IEP Neighborhood
MF GO:0018858 benzoate-CoA ligase activity IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 205 505
IPR006501 Pectinesterase_inhib_dom 32 130
No external refs found!