Mp2g12880.1

Description : methyltransferase component Nop1/fibrillarin of snoRNP rRNA methylation complex

Gene families : OG0003455 (Archaeplastida) Phylogenetic Tree(s): OG0003455_tree ,
OG_05_0003421 (LandPlants) Phylogenetic Tree(s): OG_05_0003421_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp2g12880.1
Cluster	HCCA: Cluster_160

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00218020	evm_27.TU.AmTr_v1...	RNA processing.RNA modification.rRNA/tRNA...	0.03	Archaeplastida
AMTR_s00099p00093470	evm_27.TU.AmTr_v1...	RNA processing.RNA modification.rRNA/tRNA...	0.02	Archaeplastida
AT4G25630	FIB2, ATFIB2	fibrillarin 2	0.07	Archaeplastida
AT5G52470	FIB1, ATFIB1,...	fibrillarin 1	0.06	Archaeplastida
Cpa\|evm.model.tig00001049.16	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.05	Archaeplastida
Cre02.g077300	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.06	Archaeplastida
GSVIVT01028887001	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.04	Archaeplastida
Gb_33899	No alias	methyltransferase component Nop1/fibrillarin of snoRNP...	0.02	Archaeplastida
LOC_Os05g08360.1	No alias	methyltransferase component Nop1/fibrillarin of snoRNP...	0.03	Archaeplastida
MA_124463g0010	No alias	methyltransferase component Nop1/fibrillarin of snoRNP...	0.05	Archaeplastida
Pp3c16_1450V3.1	No alias	fibrillarin 2	0.02	Archaeplastida
Pp3c27_4160V3.1	No alias	fibrillarin 2	0.04	Archaeplastida
Pp3c5_11200V3.1	No alias	fibrillarin 2	0.1	Archaeplastida
Pp3c6_12420V3.1	No alias	fibrillarin 2	0.05	Archaeplastida
Smo171051	No alias	RNA processing.RNA modification.rRNA/tRNA...	0.02	Archaeplastida
Solyc03g025270.3.1	No alias	methyltransferase component Nop1/fibrillarin of snoRNP...	0.04	Archaeplastida
Zm00001e023572_P001	No alias	methyltransferase component Nop1/fibrillarin of snoRNP...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003697	single-stranded DNA binding	IEP	Neighborhood
MF	GO:0003879	ATP phosphoribosyltransferase activity	IEP	Neighborhood
MF	GO:0004055	argininosuccinate synthase activity	IEP	Neighborhood
MF	GO:0004109	coproporphyrinogen oxidase activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006366	transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006525	arginine metabolic process	IEP	Neighborhood
BP	GO:0006526	arginine biosynthetic process	IEP	Neighborhood
BP	GO:0006547	histidine metabolic process	IEP	Neighborhood
BP	GO:0006553	lysine metabolic process	IEP	Neighborhood
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Neighborhood
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009085	lysine biosynthetic process	IEP	Neighborhood
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Neighborhood
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0045454	cell redox homeostasis	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046451	diaminopimelate metabolic process	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0052803	imidazole-containing compound metabolic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000692	Fibrillarin	73	303

External Links

No external refs found!

Mp2g12880.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation