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  5. Mp2g13280.1

Mp2g13280.1


Description : isoprenyl diphosphate synthase


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0001040 (LandPlants) Phylogenetic Tree(s): OG_05_0001040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g13280.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00175920 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.methylerythritol... 0.02 Archaeplastida
AT4G36810 GGPS1 geranylgeranyl pyrophosphate synthase 1 0.01 Archaeplastida
Cre12.g484200 No alias Secondary metabolism.terpenoids.methylerythritol... 0.06 Archaeplastida
Zm00001e023206_P001 No alias regulatory subunit of geranyl diphosphate synthase... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0005542 folic acid binding IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 137 369
No external refs found!