Coexpression cluster: Cluster_41 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 5.37% (8/149) 3.07 5e-06 0.000678
GO:0034470 ncRNA processing 4.03% (6/149) 3.8 4e-06 0.00086
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 3.36% (5/149) 4.44 3e-06 0.001195
GO:0072329 monocarboxylic acid catabolic process 1.34% (2/149) 6.44 0.000175 0.004912
GO:0034440 lipid oxidation 1.34% (2/149) 6.44 0.000175 0.004912
GO:0044242 cellular lipid catabolic process 1.34% (2/149) 6.44 0.000175 0.004912
GO:0006635 fatty acid beta-oxidation 1.34% (2/149) 6.44 0.000175 0.004912
GO:0019395 fatty acid oxidation 1.34% (2/149) 6.44 0.000175 0.004912
GO:0009062 fatty acid catabolic process 1.34% (2/149) 6.44 0.000175 0.004912
GO:0008253 5'-nucleotidase activity 1.34% (2/149) 6.44 0.000175 0.004912
GO:0008252 nucleotidase activity 1.34% (2/149) 6.44 0.000175 0.004912
GO:0003997 acyl-CoA oxidase activity 1.34% (2/149) 6.44 0.000175 0.004912
GO:0006725 cellular aromatic compound metabolic process 8.72% (13/149) 1.69 0.000213 0.004929
GO:0008173 RNA methyltransferase activity 2.01% (3/149) 4.7 0.000188 0.004943
GO:0046483 heterocycle metabolic process 8.72% (13/149) 1.69 0.000205 0.005047
GO:0034641 cellular nitrogen compound metabolic process 10.07% (15/149) 1.5 0.000287 0.00565
GO:0006139 nucleobase-containing compound metabolic process 8.05% (12/149) 1.73 0.000284 0.005895
GO:1901360 organic cyclic compound metabolic process 8.72% (13/149) 1.65 0.000279 0.006107
GO:0034660 ncRNA metabolic process 4.03% (6/149) 3.07 8.1e-05 0.006395
GO:0008033 tRNA processing 2.68% (4/149) 4.12 7.8e-05 0.00769
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 1.34% (2/149) 5.7 0.000576 0.008104
GO:0017150 tRNA dihydrouridine synthase activity 1.34% (2/149) 5.7 0.000576 0.008104
GO:0005777 peroxisome 1.34% (2/149) 5.7 0.000576 0.008104
GO:0042579 microbody 1.34% (2/149) 5.7 0.000576 0.008104
GO:0050660 flavin adenine dinucleotide binding 2.68% (4/149) 3.47 0.000459 0.008617
GO:0008152 metabolic process 24.83% (37/149) 0.78 0.000554 0.009088
GO:0032787 monocarboxylic acid metabolic process 2.68% (4/149) 3.41 0.000539 0.009236
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 2.01% (3/149) 4.22 0.000532 0.009525
GO:0030258 lipid modification 1.34% (2/149) 5.44 0.000859 0.011288
GO:0016042 lipid catabolic process 1.34% (2/149) 5.44 0.000859 0.011288
GO:0034404 nucleobase-containing small molecule biosynthetic process 2.01% (3/149) 3.91 0.001011 0.012447
GO:0044281 small molecule metabolic process 5.37% (8/149) 1.99 0.00098 0.012452
GO:0042398 cellular modified amino acid biosynthetic process 1.34% (2/149) 5.22 0.001197 0.014294
GO:0016070 RNA metabolic process 5.37% (8/149) 1.93 0.001273 0.014751
GO:0055114 oxidation-reduction process 10.07% (15/149) 1.25 0.001619 0.016783
GO:0044255 cellular lipid metabolic process 2.68% (4/149) 2.9 0.00206 0.016912
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 1.34% (2/149) 5.03 0.001588 0.016913
GO:0006613 cotranslational protein targeting to membrane 1.34% (2/149) 5.03 0.001588 0.016913
GO:0006612 protein targeting to membrane 1.34% (2/149) 5.03 0.001588 0.016913
GO:0072599 establishment of protein localization to endoplasmic reticulum 1.34% (2/149) 4.86 0.002032 0.017032
GO:0090150 establishment of protein localization to membrane 1.34% (2/149) 4.86 0.002032 0.017032
GO:0072657 protein localization to membrane 1.34% (2/149) 4.86 0.002032 0.017032
GO:0045047 protein targeting to ER 1.34% (2/149) 4.86 0.002032 0.017032
GO:0070972 protein localization to endoplasmic reticulum 1.34% (2/149) 4.86 0.002032 0.017032
GO:0046395 carboxylic acid catabolic process 1.34% (2/149) 4.86 0.002032 0.017032
GO:0016054 organic acid catabolic process 1.34% (2/149) 4.86 0.002032 0.017032
GO:0008150 biological_process 30.87% (46/149) 0.59 0.001764 0.017378
GO:0006399 tRNA metabolic process 2.68% (4/149) 2.96 0.001753 0.017711
GO:0006629 lipid metabolic process 4.03% (6/149) 2.1 0.002835 0.022342
GO:0140098 catalytic activity, acting on RNA 3.36% (5/149) 2.38 0.002788 0.022415
GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 1.34% (2/149) 4.57 0.003073 0.023284
GO:0006575 cellular modified amino acid metabolic process 1.34% (2/149) 4.57 0.003073 0.023284
GO:0055086 nucleobase-containing small molecule metabolic process 2.68% (4/149) 2.69 0.003504 0.026047
GO:0006605 protein targeting 1.34% (2/149) 4.44 0.003669 0.026771
GO:0003824 catalytic activity 26.17% (39/149) 0.59 0.00452 0.03238
GO:0006400 tRNA modification 1.34% (2/149) 4.22 0.005008 0.035237
GO:0050662 coenzyme binding 3.36% (5/149) 2.17 0.005244 0.036246
GO:0072594 establishment of protein localization to organelle 1.34% (2/149) 4.12 0.00575 0.037138
GO:1901657 glycosyl compound metabolic process 1.34% (2/149) 4.12 0.00575 0.037138
GO:0033365 protein localization to organelle 1.34% (2/149) 4.12 0.00575 0.037138
GO:0009116 nucleoside metabolic process 1.34% (2/149) 4.12 0.00575 0.037138
GO:0044283 small molecule biosynthetic process 2.68% (4/149) 2.35 0.007911 0.037552
GO:0043094 cellular metabolic compound salvage 0.67% (1/149) 7.03 0.007672 0.037785
GO:0006659 phosphatidylserine biosynthetic process 0.67% (1/149) 7.03 0.007672 0.037785
GO:0050483 IMP 5'-nucleotidase activity 0.67% (1/149) 7.03 0.007672 0.037785
GO:0046487 glyoxylate metabolic process 0.67% (1/149) 7.03 0.007672 0.037785
GO:0043101 purine-containing compound salvage 0.67% (1/149) 7.03 0.007672 0.037785
GO:0006190 inosine salvage 0.67% (1/149) 7.03 0.007672 0.037785
GO:0046103 inosine biosynthetic process 0.67% (1/149) 7.03 0.007672 0.037785
GO:0046102 inosine metabolic process 0.67% (1/149) 7.03 0.007672 0.037785
GO:0004806 triglyceride lipase activity 0.67% (1/149) 7.03 0.007672 0.037785
GO:0006166 purine ribonucleoside salvage 0.67% (1/149) 7.03 0.007672 0.037785
GO:0043174 nucleoside salvage 0.67% (1/149) 7.03 0.007672 0.037785
GO:0006658 phosphatidylserine metabolic process 0.67% (1/149) 7.03 0.007672 0.037785
GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity 0.67% (1/149) 7.03 0.007672 0.037785
GO:0006097 glyoxylate cycle 0.67% (1/149) 7.03 0.007672 0.037785
GO:0009264 deoxyribonucleotide catabolic process 0.67% (1/149) 7.03 0.007672 0.037785
GO:0004474 malate synthase activity 0.67% (1/149) 7.03 0.007672 0.037785
GO:0019752 carboxylic acid metabolic process 3.36% (5/149) 2.03 0.007885 0.037885
GO:0043436 oxoacid metabolic process 3.36% (5/149) 2.03 0.007885 0.037885
GO:0006082 organic acid metabolic process 3.36% (5/149) 2.02 0.008088 0.037938
GO:0016491 oxidoreductase activity 9.4% (14/149) 1.04 0.008219 0.038099
GO:0008168 methyltransferase activity 3.36% (5/149) 1.97 0.009162 0.041973
GO:0090304 nucleic acid metabolic process 5.37% (8/149) 1.45 0.009408 0.042605
GO:0071704 organic substance metabolic process 16.11% (24/149) 0.72 0.009684 0.043356
GO:0044248 cellular catabolic process 2.68% (4/149) 2.41 0.006884 0.043746
GO:0140101 catalytic activity, acting on a tRNA 2.01% (3/149) 2.75 0.010036 0.044428
GO:0044238 primary metabolic process 15.44% (23/149) 0.74 0.010366 0.044883
GO:1901135 carbohydrate derivative metabolic process 2.68% (4/149) 2.24 0.010255 0.044895
GO:0034613 cellular protein localization 1.34% (2/149) 3.94 0.007373 0.04539
GO:0070727 cellular macromolecule localization 1.34% (2/149) 3.94 0.007373 0.04539
GO:0044282 small molecule catabolic process 1.34% (2/149) 3.63 0.011159 0.047276
GO:0016741 transferase activity, transferring one-carbon groups 3.36% (5/149) 1.91 0.011077 0.047437
GO:0009058 biosynthetic process 6.71% (10/149) 1.21 0.011801 0.049464
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.051 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_28 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.043 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.054 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_211 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.031 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_133 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_194 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.035 Archaeplastida Compare
Gingko biloba HCCA Cluster_250 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_327 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.046 Archaeplastida Compare
Zea mays HCCA Cluster_48 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_70 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_107 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_168 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_180 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.042 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.045 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.084 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_55 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_233 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_260 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_82 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_354 0.038 Archaeplastida Compare
Picea abies HCCA Cluster_446 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_14 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_63 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_188 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_218 0.048 Archaeplastida Compare
Oryza sativa HCCA Cluster_262 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_100 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_120 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_33 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_101 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.045 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_157 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_160 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.038 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.04 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.045 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.038 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_32 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_36 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_79 0.019 Archaeplastida Compare
Sequences (149) (download table)

InterPro Domains

GO Terms

Family Terms