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  5. AT3G61350

AT3G61350 (SKIP4)


Aliases : SKIP4

Description : SKP1 interacting partner 4


Gene families : OG0008249 (Archaeplastida) Phylogenetic Tree(s): OG0008249_tree ,
OG_05_0006953 (LandPlants) Phylogenetic Tree(s): OG_05_0006953_tree ,
OG_06_0008197 (SeedPlants) Phylogenetic Tree(s): OG_06_0008197_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G61350
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g02350.1 No alias F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0009409 response to cold IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Neighborhood
MF GO:0000149 SNARE binding IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
CC GO:0000811 GINS complex IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
BP GO:0001558 regulation of cell growth IEP Neighborhood
BP GO:0002683 negative regulation of immune system process IEP Neighborhood
BP GO:0002832 negative regulation of response to biotic stimulus IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004607 phosphatidylcholine-sterol O-acyltransferase activity IEP Neighborhood
MF GO:0004725 protein tyrosine phosphatase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006706 steroid catabolic process IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007112 male meiosis cytokinesis IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
BP GO:0007131 reciprocal meiotic recombination IEP Neighborhood
BP GO:0007349 cellularization IEP Neighborhood
CC GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing) IEP Neighborhood
BP GO:0009558 embryo sac cellularization IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
BP GO:0010113 negative regulation of systemic acquired resistance IEP Neighborhood
BP GO:0010196 nonphotochemical quenching IEP Neighborhood
BP GO:0010245 radial microtubular system formation IEP Neighborhood
MF GO:0010385 double-stranded methylated DNA binding IEP Neighborhood
BP GO:0015865 purine nucleotide transport IEP Neighborhood
BP GO:0015867 ATP transport IEP Neighborhood
BP GO:0015868 purine ribonucleotide transport IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016127 sterol catabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030307 positive regulation of cell growth IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
MF GO:0030946 protein tyrosine phosphatase activity, metal-dependent IEP Neighborhood
CC GO:0031261 DNA replication preinitiation complex IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0032102 negative regulation of response to external stimulus IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0033206 meiotic cytokinesis IEP Neighborhood
BP GO:0034433 steroid esterification IEP Neighborhood
BP GO:0034434 sterol esterification IEP Neighborhood
BP GO:0035825 homologous recombination IEP Neighborhood
BP GO:0042023 DNA endoreduplication IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
BP GO:0042273 ribosomal large subunit biogenesis IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0043901 negative regulation of multi-organism process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0044786 cell cycle DNA replication IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0045824 negative regulation of innate immune response IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
MF GO:0046976 histone methyltransferase activity (H3-K27 specific) IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0050777 negative regulation of immune response IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051503 adenine nucleotide transport IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
BP GO:0070734 histone H3-K27 methylation IEP Neighborhood
MF GO:0080095 phosphatidylethanolamine-sterol O-acyltransferase activity IEP Neighborhood
MF GO:0080096 phosphatidate-sterol O-acyltransferase activity IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
BP GO:1990066 energy quenching IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 22 60
IPR006652 Kelch_1 111 150
IPR006652 Kelch_1 161 204
No external refs found!