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Description : RING/U-box superfamily protein
Gene families : OG0002063 (Archaeplastida) Phylogenetic Tree(s): OG0002063_tree ,
OG_05_0003368 (LandPlants) Phylogenetic Tree(s): OG_05_0003368_tree ,
OG_06_0003836 (SeedPlants) Phylogenetic Tree(s): OG_06_0003836_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G62240 | |
| Cluster | HCCA: Cluster_24 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000059 | obsolete protein import into nucleus, docking | IEP | Neighborhood |
| MF | GO:0000217 | DNA secondary structure binding | IEP | Neighborhood |
| CC | GO:0000228 | nuclear chromosome | IEP | Neighborhood |
| MF | GO:0000404 | heteroduplex DNA loop binding | IEP | Neighborhood |
| BP | GO:0000710 | meiotic mismatch repair | IEP | Neighborhood |
| MF | GO:0000976 | transcription regulatory region sequence-specific DNA binding | IEP | Neighborhood |
| MF | GO:0000987 | proximal promoter sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0003006 | developmental process involved in reproduction | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003774 | motor activity | IEP | Neighborhood |
| MF | GO:0003983 | UTP:glucose-1-phosphate uridylyltransferase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0004407 | histone deacetylase activity | IEP | Neighborhood |
| MF | GO:0004835 | tubulin-tyrosine ligase activity | IEP | Neighborhood |
| MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0006011 | UDP-glucose metabolic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
| BP | GO:0006304 | DNA modification | IEP | Neighborhood |
| BP | GO:0006305 | DNA alkylation | IEP | Neighborhood |
| BP | GO:0006306 | DNA methylation | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006323 | DNA packaging | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006473 | protein acetylation | IEP | Neighborhood |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Neighborhood |
| BP | GO:0007129 | synapsis | IEP | Neighborhood |
| BP | GO:0007131 | reciprocal meiotic recombination | IEP | Neighborhood |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Neighborhood |
| CC | GO:0008278 | cohesin complex | IEP | Neighborhood |
| BP | GO:0008608 | attachment of spindle microtubules to kinetochore | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0009908 | flower development | IEP | Neighborhood |
| BP | GO:0010030 | positive regulation of seed germination | IEP | Neighborhood |
| BP | GO:0010032 | meiotic chromosome condensation | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| MF | GO:0010491 | UTP:arabinose-1-phosphate uridylyltransferase activity | IEP | Neighborhood |
| BP | GO:0010528 | regulation of transposition | IEP | Neighborhood |
| BP | GO:0010529 | negative regulation of transposition | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| MF | GO:0016407 | acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Neighborhood |
| BP | GO:0016458 | gene silencing | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| BP | GO:0016573 | histone acetylation | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Neighborhood |
| MF | GO:0017103 | UTP:galactose-1-phosphate uridylyltransferase activity | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0018195 | peptidyl-arginine modification | IEP | Neighborhood |
| BP | GO:0018216 | peptidyl-arginine methylation | IEP | Neighborhood |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Neighborhood |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| BP | GO:0030261 | chromosome condensation | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0032135 | DNA insertion or deletion binding | IEP | Neighborhood |
| BP | GO:0032259 | methylation | IEP | Neighborhood |
| CC | GO:0032300 | mismatch repair complex | IEP | Neighborhood |
| MF | GO:0032451 | demethylase activity | IEP | Neighborhood |
| MF | GO:0032452 | histone demethylase activity | IEP | Neighborhood |
| BP | GO:0033233 | regulation of protein sumoylation | IEP | Neighborhood |
| BP | GO:0033234 | negative regulation of protein sumoylation | IEP | Neighborhood |
| BP | GO:0033356 | UDP-L-arabinose metabolic process | IEP | Neighborhood |
| MF | GO:0033558 | protein deacetylase activity | IEP | Neighborhood |
| MF | GO:0033746 | histone demethylase activity (H3-R2 specific) | IEP | Neighborhood |
| MF | GO:0033749 | histone demethylase activity (H4-R3 specific) | IEP | Neighborhood |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0034969 | histone arginine methylation | IEP | Neighborhood |
| MF | GO:0035197 | siRNA binding | IEP | Neighborhood |
| BP | GO:0035825 | homologous recombination | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
| BP | GO:0043543 | protein acylation | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0043570 | maintenance of DNA repeat elements | IEP | Neighborhood |
| BP | GO:0043687 | post-translational protein modification | IEP | Neighborhood |
| BP | GO:0043985 | histone H4-R3 methylation | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | Neighborhood |
| BP | GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | IEP | Neighborhood |
| BP | GO:0045132 | meiotic chromosome segregation | IEP | Neighborhood |
| BP | GO:0045596 | negative regulation of cell differentiation | IEP | Neighborhood |
| BP | GO:0046398 | UDP-glucuronate metabolic process | IEP | Neighborhood |
| MF | GO:0047338 | UTP:xylose-1-phosphate uridylyltransferase activity | IEP | Neighborhood |
| MF | GO:0047350 | glucuronate-1-phosphate uridylyltransferase activity | IEP | Neighborhood |
| BP | GO:0048443 | stamen development | IEP | Neighborhood |
| BP | GO:0048481 | plant ovule development | IEP | Neighborhood |
| BP | GO:0048497 | maintenance of floral organ identity | IEP | Neighborhood |
| BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
| BP | GO:0051093 | negative regulation of developmental process | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051177 | meiotic sister chromatid cohesion | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0051316 | attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation | IEP | Neighborhood |
| BP | GO:0051455 | attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation | IEP | Neighborhood |
| MF | GO:0051748 | UTP-monosaccharide-1-phosphate uridylyltransferase activity | IEP | Neighborhood |
| BP | GO:0051754 | meiotic sister chromatid cohesion, centromeric | IEP | Neighborhood |
| BP | GO:0052573 | UDP-D-galactose metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0060341 | regulation of cellular localization | IEP | Neighborhood |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0061980 | regulatory RNA binding | IEP | Neighborhood |
| BP | GO:0061982 | meiosis I cell cycle process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | Neighborhood |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Neighborhood |
| BP | GO:0070601 | centromeric sister chromatid cohesion | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:0080154 | regulation of fertilization | IEP | Neighborhood |
| BP | GO:0080155 | regulation of double fertilization forming a zygote and endosperm | IEP | Neighborhood |
| BP | GO:0080188 | RNA-directed DNA methylation | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0090567 | reproductive shoot system development | IEP | Neighborhood |
| BP | GO:0090700 | maintenance of plant organ identity | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:0098813 | nuclear chromosome segregation | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1903046 | meiotic cell cycle process | IEP | Neighborhood |
| BP | GO:1903320 | regulation of protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:1903321 | negative regulation of protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1903827 | regulation of cellular protein localization | IEP | Neighborhood |
| CC | GO:1990391 | DNA repair complex | IEP | Neighborhood |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Neighborhood |
| BP | GO:2000008 | regulation of protein localization to cell surface | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |