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  5. Mp2g25390.1

Mp2g25390.1


Description : Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana (sp|q9lhf1|lrx4_arath : 317.0)


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g25390.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.02 Archaeplastida
AT1G49750 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_08992 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os01g08470.1 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os02g04540.1 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os05g08770.2 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os06g49100.1 No alias LRR-domain extensin 0.02 Archaeplastida
MA_100985g0010 No alias LRR-domain extensin 0.02 Archaeplastida
Solyc09g082530.3.1 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e015109_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e020600_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e025924_P001 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e041184_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005548 phospholipid transporter activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015914 phospholipid transport IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 66 99
No external refs found!