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Description : component RPP1 of LSU proteome component
Gene families : OG0001913 (Archaeplastida) Phylogenetic Tree(s): OG0001913_tree ,
OG_05_0002230 (LandPlants) Phylogenetic Tree(s): OG_05_0002230_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp3g02890.1 | |
| Cluster | HCCA: Cluster_115 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00100p00050800 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | Archaeplastida | |
| AT1G01100 | No alias | 60S acidic ribosomal protein family | 0.11 | Archaeplastida | |
| AT4G00810 | No alias | 60S acidic ribosomal protein family | 0.06 | Archaeplastida | |
| AT5G47700 | No alias | 60S acidic ribosomal protein family | 0.08 | Archaeplastida | |
| Cpa|evm.model.tig00000342.4 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | Archaeplastida | |
| Cre17.g738300 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | Archaeplastida | |
| GSVIVT01019679001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | Archaeplastida | |
| GSVIVT01027436001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | Archaeplastida | |
| GSVIVT01038637001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | Archaeplastida | |
| LOC_Os08g02340.1 | No alias | component RPP1 of LSU proteome component | 0.09 | Archaeplastida | |
| MA_10430200g0010 | No alias | component RPP1 of LSU proteome component | 0.06 | Archaeplastida | |
| MA_90134g0010 | No alias | component RPP1 of LSU proteome component | 0.08 | Archaeplastida | |
| Pp3c14_21510V3.1 | No alias | 60S acidic ribosomal protein family | 0.03 | Archaeplastida | |
| Pp3c17_22190V3.1 | No alias | 60S acidic ribosomal protein family | 0.06 | Archaeplastida | |
| Pp3c1_36220V3.1 | No alias | 60S acidic ribosomal protein family | 0.06 | Archaeplastida | |
| Pp3c20_2800V3.1 | No alias | 60S acidic ribosomal protein family | 0.05 | Archaeplastida | |
| Pp3c23_18100V3.1 | No alias | 60S acidic ribosomal protein family | 0.1 | Archaeplastida | |
| Pp3c8_22380V3.1 | No alias | 60S acidic ribosomal protein family | 0.09 | Archaeplastida | |
| Smo133023 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | Archaeplastida | |
| Solyc01g006160.3.1 | No alias | component RPP1 of LSU proteome component | 0.03 | Archaeplastida | |
| Solyc01g016470.3.1 | No alias | component RPP1 of LSU proteome component | 0.08 | Archaeplastida | |
| Solyc01g104370.4.1 | No alias | component RPP1 of LSU proteome component | 0.04 | Archaeplastida | |
| Zm00001e029197_P001 | No alias | component RPP1 of LSU proteome component | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0003333 | amino acid transmembrane transport | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0004359 | glutaminase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006865 | amino acid transport | IEP | Neighborhood |
| MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0010333 | terpene synthase activity | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015711 | organic anion transport | IEP | Neighborhood |
| BP | GO:0015849 | organic acid transport | IEP | Neighborhood |
| BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
| BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Neighborhood |
| BP | GO:0017144 | drug metabolic process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019829 | cation-transporting ATPase activity | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Neighborhood |
| BP | GO:0034220 | ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
| MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0042816 | vitamin B6 metabolic process | IEP | Neighborhood |
| BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Neighborhood |
| BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Neighborhood |
| CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Neighborhood |
| BP | GO:0046184 | aldehyde biosynthetic process | IEP | Neighborhood |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Neighborhood |
| BP | GO:0046942 | carboxylic acid transport | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0098656 | anion transmembrane transport | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Neighborhood |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |