Mp3g07940.1

Description : pre-mRNA splicing regulator (DDX5)

Gene families : OG0000695 (Archaeplastida) Phylogenetic Tree(s): OG0000695_tree ,
OG_05_0003605 (LandPlants) Phylogenetic Tree(s): OG_05_0003605_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp3g07940.1
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00263980	evm_27.TU.AmTr_v1...	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	Archaeplastida
Cre12.g540200	No alias	DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa...	0.02	Archaeplastida
GSVIVT01016847001	No alias	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	Archaeplastida
Gb_10302	No alias	DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis...	0.02	Archaeplastida
LOC_Os01g10050.2	No alias	pre-mRNA splicing regulator (DDX5)	0.04	Archaeplastida
LOC_Os01g36860.1	No alias	DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa...	0.05	Archaeplastida
LOC_Os01g68320.2	No alias	pre-mRNA splicing regulator (DDX5)	0.02	Archaeplastida
LOC_Os11g46240.1	No alias	DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis...	0.03	Archaeplastida
MA_10432707g0010	No alias	DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis...	0.03	Archaeplastida
MA_19015g0010	No alias	pre-mRNA splicing regulator (DDX5)	0.02	Archaeplastida
Smo98552	No alias	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	Archaeplastida
Solyc12g044860.3.1	No alias	DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis...	0.02	Archaeplastida
Zm00001e011376_P001	No alias	ATP-dependent RNA helicase-like protein DB10...	0.03	Archaeplastida
Zm00001e016546_P001	No alias	pre-mRNA splicing regulator (DDX5)	0.02	Archaeplastida
Zm00001e020727_P006	No alias	DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa...	0.03	Archaeplastida
Zm00001e020972_P005	No alias	DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint	IEP	Neighborhood
BP	GO:0001510	RNA methylation	IEP	Neighborhood
MF	GO:0001671	ATPase activator activity	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003684	damaged DNA binding	IEP	Neighborhood
MF	GO:0003689	DNA clamp loader activity	IEP	Neighborhood
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005643	nuclear pore	IEP	Neighborhood
CC	GO:0005663	DNA replication factor C complex	IEP	Neighborhood
CC	GO:0005730	nucleolus	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006338	chromatin remodeling	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0007088	regulation of mitotic nuclear division	IEP	Neighborhood
BP	GO:0007093	mitotic cell cycle checkpoint	IEP	Neighborhood
BP	GO:0007094	mitotic spindle assembly checkpoint	IEP	Neighborhood
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Neighborhood
MF	GO:0008047	enzyme activator activity	IEP	Neighborhood
MF	GO:0008094	DNA-dependent ATPase activity	IEP	Neighborhood
MF	GO:0008192	RNA guanylyltransferase activity	IEP	Neighborhood
MF	GO:0008193	tRNA guanylyltransferase activity	IEP	Neighborhood
MF	GO:0008235	metalloexopeptidase activity	IEP	Neighborhood
BP	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
BP	GO:0010564	regulation of cell cycle process	IEP	Neighborhood
BP	GO:0010639	negative regulation of organelle organization	IEP	Neighborhood
BP	GO:0010948	negative regulation of cell cycle process	IEP	Neighborhood
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	Neighborhood
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
CC	GO:0016272	prefoldin complex	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
BP	GO:0016556	mRNA modification	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
MF	GO:0019781	NEDD8 activating enzyme activity	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
BP	GO:0031123	RNA 3'-end processing	IEP	Neighborhood
BP	GO:0031124	mRNA 3'-end processing	IEP	Neighborhood
MF	GO:0031491	nucleosome binding	IEP	Neighborhood
BP	GO:0031577	spindle checkpoint	IEP	Neighborhood
BP	GO:0033043	regulation of organelle organization	IEP	Neighborhood
BP	GO:0033044	regulation of chromosome organization	IEP	Neighborhood
BP	GO:0033045	regulation of sister chromatid segregation	IEP	Neighborhood
BP	GO:0033046	negative regulation of sister chromatid segregation	IEP	Neighborhood
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	Neighborhood
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	IEP	Neighborhood
MF	GO:0033170	protein-DNA loading ATPase activity	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0042393	histone binding	IEP	Neighborhood
MF	GO:0042623	ATPase activity, coupled	IEP	Neighborhood
BP	GO:0043044	ATP-dependent chromatin remodeling	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043248	proteasome assembly	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
CC	GO:0044428	nuclear part	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0045116	protein neddylation	IEP	Neighborhood
BP	GO:0045786	negative regulation of cell cycle	IEP	Neighborhood
BP	GO:0045839	negative regulation of mitotic nuclear division	IEP	Neighborhood
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	IEP	Neighborhood
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
MF	GO:0051087	chaperone binding	IEP	Neighborhood
BP	GO:0051129	negative regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood
BP	GO:0051783	regulation of nuclear division	IEP	Neighborhood
BP	GO:0051784	negative regulation of nuclear division	IEP	Neighborhood
BP	GO:0051983	regulation of chromosome segregation	IEP	Neighborhood
BP	GO:0051985	negative regulation of chromosome segregation	IEP	Neighborhood
MF	GO:0060090	molecular adaptor activity	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood
MF	GO:0060590	ATPase regulator activity	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
MF	GO:0070568	guanylyltransferase activity	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0071173	spindle assembly checkpoint	IEP	Neighborhood
BP	GO:0071174	mitotic spindle checkpoint	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0080009	mRNA methylation	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Neighborhood
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	Neighborhood
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Neighborhood
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	IEP	Neighborhood
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	Neighborhood
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	IEP	Neighborhood
BP	GO:1903047	mitotic cell cycle process	IEP	Neighborhood
BP	GO:1905818	regulation of chromosome separation	IEP	Neighborhood
BP	GO:1905819	negative regulation of chromosome separation	IEP	Neighborhood
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	IEP	Neighborhood
BP	GO:2001251	negative regulation of chromosome organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	355	464
IPR011545	DEAD/DEAH_box_helicase_dom	148	317

External Links

No external refs found!

Mp3g07940.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation