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  5. AT3G63280

AT3G63280 (NEK4, ATNEK4)


Aliases : NEK4, ATNEK4

Description : NIMA-related kinase 4


Gene families : OG0000440 (Archaeplastida) Phylogenetic Tree(s): OG0000440_tree ,
OG_05_0000639 (LandPlants) Phylogenetic Tree(s): OG_05_0000639_tree ,
OG_06_0000575 (SeedPlants) Phylogenetic Tree(s): OG_06_0000575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G63280
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00240740 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.NEK kinase 0.05 Archaeplastida
AMTR_s00066p00060990 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01021831001 No alias Protein modification.phosphorylation.NEK kinase 0.03 Archaeplastida
GSVIVT01033338001 No alias Protein modification.phosphorylation.NEK kinase 0.04 Archaeplastida
LOC_Os01g64490.1 No alias protein kinase (NEK) 0.05 Archaeplastida
LOC_Os02g37830.1 No alias protein kinase (NEK) 0.06 Archaeplastida
LOC_Os05g36960.1 No alias protein kinase (NEK) 0.05 Archaeplastida
MA_127019g0010 No alias protein kinase (NEK) 0.03 Archaeplastida
Mp5g04500.1 No alias protein kinase (NEK) 0.02 Archaeplastida
Smo108317 No alias Protein modification.phosphorylation.NEK kinase 0.04 Archaeplastida
Solyc01g009300.3.1 No alias protein kinase (NEK) 0.04 Archaeplastida
Solyc09g065570.4.1 No alias No annotation 0.09 Archaeplastida
Solyc10g080390.2.1 No alias protein kinase (NEK) 0.04 Archaeplastida
Solyc11g071970.2.1 No alias protein kinase (NEK) 0.04 Archaeplastida
Zm00001e014973_P004 No alias protein kinase (NEK) 0.03 Archaeplastida
Zm00001e019178_P001 No alias protein kinase (NEK) 0.04 Archaeplastida
Zm00001e031751_P001 No alias protein kinase (NEK) 0.1 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
MF GO:0016301 kinase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0004779 sulfate adenylyltransferase activity IEP Neighborhood
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005249 voltage-gated potassium channel activity IEP Neighborhood
MF GO:0005261 cation channel activity IEP Neighborhood
MF GO:0005267 potassium channel activity IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006598 polyamine catabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009808 lignin metabolic process IEP Neighborhood
BP GO:0009809 lignin biosynthetic process IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009900 dehiscence IEP Neighborhood
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0010047 fruit dehiscence IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
MF GO:0015271 outward rectifier potassium channel activity IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016207 4-coumarate-CoA ligase activity IEP Neighborhood
MF GO:0016405 CoA-ligase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016878 acid-thiol ligase activity IEP Neighborhood
BP GO:0016926 protein desumoylation IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022843 voltage-gated cation channel activity IEP Neighborhood
MF GO:0030551 cyclic nucleotide binding IEP Neighborhood
MF GO:0031176 endo-1,4-beta-xylanase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0035265 organ growth IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0047631 ADP-ribose diphosphatase activity IEP Neighborhood
MF GO:0047782 coniferin beta-glucosidase activity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097599 xylanase activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Neighborhood
BP GO:1903409 reactive oxygen species biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000652 regulation of secondary cell wall biogenesis IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 4 257
No external refs found!