AT4G00480 (myc1, ATMYC1)


Aliases : myc1, ATMYC1

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0002624 (Archaeplastida) Phylogenetic Tree(s): OG0002624_tree ,
OG_05_0002177 (LandPlants) Phylogenetic Tree(s): OG_05_0002177_tree ,
OG_06_0001598 (SeedPlants) Phylogenetic Tree(s): OG_06_0001598_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G00480
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019750001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc08g081140.4.1 No alias transcription factor (bHLH) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification RCA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009913 epidermal cell differentiation RCA Interproscan
BP GO:0009957 epidermal cell fate specification RCA Interproscan
BP GO:0048629 trichome patterning IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009736 cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 23 216
No external refs found!