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  5. Mp3g22300.1

Mp3g22300.1


Description : component IWS1 of SPT6-IWS1 transcription elongation complex


Gene families : OG0004220 (Archaeplastida) Phylogenetic Tree(s): OG0004220_tree ,
OG_05_0007207 (LandPlants) Phylogenetic Tree(s): OG_05_0007207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g22300.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011111001 No alias Protein IWS1 homolog 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo269116 No alias Protein IWS1 homolog 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e016922_P001 No alias component IWS1 of SPT6-IWS1 transcription elongation complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR017923 TFIIS_N 313 367
No external refs found!