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Description : Reticulon family protein
Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree ,
OG_06_0043273 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G01230 | |
| Cluster | HCCA: Cluster_189 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00044p00221140 | evm_27.TU.AmTr_v1... | Reticulon-like protein B9 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00000704.69 | No alias | No description available | 0.02 | Archaeplastida | |
| Cre06.g308950 | No alias | No description available | 0.01 | Archaeplastida | |
| LOC_Os01g63240.1 | No alias | ER-associated protein (Reticulon) | 0.02 | Archaeplastida | |
| LOC_Os04g29920.1 | No alias | ER-associated protein (Reticulon) | 0.02 | Archaeplastida | |
| LOC_Os05g24770.1 | No alias | ER-associated protein (Reticulon) | 0.06 | Archaeplastida | |
| Solyc03g119190.3.1 | No alias | ER-associated protein (Reticulon) | 0.02 | Archaeplastida | |
| Solyc06g082740.3.1 | No alias | ER-associated protein (Reticulon) | 0.04 | Archaeplastida | |
| Solyc09g055250.3.1 | No alias | ER-associated protein (Reticulon) | 0.05 | Archaeplastida | |
| Zm00001e027185_P001 | No alias | ER-associated protein (Reticulon) | 0.04 | Archaeplastida | |
| Zm00001e031043_P001 | No alias | ER-associated protein (Reticulon) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| CC | GO:0005783 | endoplasmic reticulum | ISS | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Neighborhood |
| MF | GO:0004396 | hexokinase activity | IEP | Neighborhood |
| MF | GO:0004439 | phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | IEP | Neighborhood |
| MF | GO:0004448 | isocitrate dehydrogenase activity | IEP | Neighborhood |
| MF | GO:0004449 | isocitrate dehydrogenase (NAD+) activity | IEP | Neighborhood |
| MF | GO:0004630 | phospholipase D activity | IEP | Neighborhood |
| MF | GO:0004845 | uracil phosphoribosyltransferase activity | IEP | Neighborhood |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
| CC | GO:0005795 | Golgi stack | IEP | Neighborhood |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Neighborhood |
| BP | GO:0006101 | citrate metabolic process | IEP | Neighborhood |
| BP | GO:0006102 | isocitrate metabolic process | IEP | Neighborhood |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
| BP | GO:0009664 | plant-type cell wall organization | IEP | Neighborhood |
| MF | GO:0009672 | auxin:proton symporter activity | IEP | Neighborhood |
| BP | GO:0009827 | plant-type cell wall modification | IEP | Neighborhood |
| BP | GO:0009860 | pollen tube growth | IEP | Neighborhood |
| BP | GO:0010208 | pollen wall assembly | IEP | Neighborhood |
| BP | GO:0010315 | auxin efflux | IEP | Neighborhood |
| BP | GO:0010584 | pollen exine formation | IEP | Neighborhood |
| BP | GO:0010927 | cellular component assembly involved in morphogenesis | IEP | Neighborhood |
| MF | GO:0015293 | symporter activity | IEP | Neighborhood |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Neighborhood |
| MF | GO:0015295 | solute:proton symporter activity | IEP | Neighborhood |
| MF | GO:0016211 | ammonia ligase activity | IEP | Neighborhood |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Neighborhood |
| CC | GO:0016459 | myosin complex | IEP | Neighborhood |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Neighborhood |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Neighborhood |
| CC | GO:0031225 | anchored component of membrane | IEP | Neighborhood |
| BP | GO:0032957 | inositol trisphosphate metabolic process | IEP | Neighborhood |
| MF | GO:0034593 | phosphatidylinositol bisphosphate phosphatase activity | IEP | Neighborhood |
| MF | GO:0034595 | phosphatidylinositol phosphate 5-phosphatase activity | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
| MF | GO:0052866 | phosphatidylinositol phosphate phosphatase activity | IEP | Neighborhood |
| BP | GO:0060211 | regulation of nuclear-transcribed mRNA poly(A) tail shortening | IEP | Neighborhood |
| BP | GO:0061013 | regulation of mRNA catabolic process | IEP | Neighborhood |
| MF | GO:0106019 | phosphatidylinositol-4,5-bisphosphate phosphatase activity | IEP | Neighborhood |
| BP | GO:1900151 | regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | IEP | Neighborhood |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003388 | Reticulon | 69 | 221 |
| No external refs found! |