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  5. Mp4g02760.1

Mp4g02760.1


Description : Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare (sp|p0cg86|rs271_horvu : 134.0)


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000113 (LandPlants) Phylogenetic Tree(s): OG_05_0000113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g02760.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00094950 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
AMTR_s00040p00104050 evm_27.TU.AmTr_v1... Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris 0.02 Archaeplastida
AT4G02890 UBQ14 Ubiquitin family protein 0.03 Archaeplastida
Cpa|evm.model.tig00021318.73 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Cpa|evm.model.tig00022075.50 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
GSVIVT01022543001 No alias Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum 0.02 Archaeplastida
GSVIVT01038617001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Gb_01257 No alias component RPL40 of LSU proteome component 0.02 Archaeplastida
LOC_Os02g06640.1 No alias ubiquitin-fold protein (UBQ) 0.02 Archaeplastida
MA_9420337g0010 No alias ubiquitin-fold protein (UBQ) 0.03 Archaeplastida
Pp3c10_25270V3.1 No alias ubiquitin extension protein 1 0.03 Archaeplastida
Pp3c20_23170V3.1 No alias ubiquitin extension protein 1 0.03 Archaeplastida
Pp3c3_25480V3.1 No alias ubiquitin extension protein 1 0.03 Archaeplastida
Pp3c4_11430V3.1 No alias polyubiquitin 10 0.03 Archaeplastida
Pp3c8_14230V3.1 No alias ubiquitin 6 0.02 Archaeplastida
Solyc11g005635.1.1 No alias Ubiquitin-40S ribosomal protein S27a-3 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e000962_P001 No alias component RPL40 of LSU proteome component 0.02 Archaeplastida
Zm00001e034164_P001 No alias ubiquitin-fold protein (RUB) 0.03 Archaeplastida
Zm00001e036492_P001 No alias Ubiquitin-40S ribosomal protein S27a OS=Solanum... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
No external refs found!