Mp4g12190.1

Description : scaffold component CUL3 of CUL3-BTB E3 ligase complexes

Gene families : OG0001033 (Archaeplastida) Phylogenetic Tree(s): OG0001033_tree ,
OG_05_0002897 (LandPlants) Phylogenetic Tree(s): OG_05_0002897_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp4g12190.1
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00095p00133680	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
AT5G46210	ATCUL4, CUL4	cullin4	0.02	Archaeplastida
Cre07.g324050	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.01	Archaeplastida
Cre12.g516500	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.02	Archaeplastida
GSVIVT01020008001	No alias	Cullin-3A OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01021502001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.02	Archaeplastida
Gb_27360	No alias	scaffold component CUL3 of CUL3-BTB E3 ligase complexes	0.03	Archaeplastida
LOC_Os02g51180.1	No alias	scaffold component CUL3 of CUL3-BTB E3 ligase complexes	0.02	Archaeplastida
MA_36374g0010	No alias	Cullin-4 OS=Arabidopsis thaliana (sp\|q8lgh4\|cul4_arath : 352.0)	0.02	Archaeplastida
Pp3c11_21000V3.1	No alias	cullin 3	0.03	Archaeplastida
Pp3c12_14490V3.1	No alias	cullin4	0.04	Archaeplastida
Pp3c3_20200V3.1	No alias	cullin4	0.03	Archaeplastida
Pp3c7_5730V3.1	No alias	cullin 3	0.03	Archaeplastida
Smo172620	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.02	Archaeplastida
Smo98006	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.02	Archaeplastida
Solyc01g010820.3.1	No alias	scaffold component CUL3 of CUL3-BTB E3 ligase complexes	0.02	Archaeplastida
Zm00001e005919_P001	No alias	scaffold component CUL4 of CUL4-DDB1 ubiquitination...	0.04	Archaeplastida
Zm00001e015820_P001	No alias	scaffold component CUL3 of CUL3-BTB E3 ligase complexes	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Neighborhood
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Neighborhood
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Neighborhood
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004484	mRNA guanylyltransferase activity	IEP	Neighborhood
MF	GO:0004659	prenyltransferase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
CC	GO:0005681	spliceosomal complex	IEP	Neighborhood
BP	GO:0006370	7-methylguanosine mRNA capping	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Neighborhood
BP	GO:0006914	autophagy	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008192	RNA guanylyltransferase activity	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0008318	protein prenyltransferase activity	IEP	Neighborhood
BP	GO:0009452	7-methylguanosine RNA capping	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
BP	GO:0010646	regulation of cell communication	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016289	CoA hydrolase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016603	glutaminyl-peptide cyclotransferase activity	IEP	Neighborhood
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016755	transferase activity, transferring amino-acyl groups	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016972	thiol oxidase activity	IEP	Neighborhood
MF	GO:0017025	TBP-class protein binding	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0017186	peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	IEP	Neighborhood
BP	GO:0018199	peptidyl-glutamine modification	IEP	Neighborhood
BP	GO:0018342	protein prenylation	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0023051	regulation of signaling	IEP	Neighborhood
CC	GO:0030127	COPII vesicle coat	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
MF	GO:0035091	phosphatidylinositol binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0036260	RNA capping	IEP	Neighborhood
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
BP	GO:0045048	protein insertion into ER membrane	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0051205	protein insertion into membrane	IEP	Neighborhood
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
MF	GO:0070568	guanylyltransferase activity	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
BP	GO:0097354	prenylation	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
MF	GO:1990380	Lys48-specific deubiquitinase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR019559	Cullin_neddylation_domain	671	731
IPR001373	Cullin_N	29	639

External Links

No external refs found!

Mp4g12190.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation