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  5. AT4G02290

AT4G02290 (AtGH9B13, GH9B13)


Aliases : AtGH9B13, GH9B13

Description : glycosyl hydrolase 9B13


Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0000198 (LandPlants) Phylogenetic Tree(s): OG_05_0000198_tree ,
OG_06_0000304 (SeedPlants) Phylogenetic Tree(s): OG_06_0000304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G02290
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00121890 evm_27.TU.AmTr_v1... Endoglucanase 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00010p00165730 evm_27.TU.AmTr_v1... Endoglucanase 8 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00024p00234390 evm_27.TU.AmTr_v1... Endoglucanase 16 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00159p00033510 evm_27.TU.AmTr_v1... Endoglucanase 6 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01018619001 No alias Endoglucanase 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01019420001 No alias Endoglucanase OS=Phaseolus vulgaris 0.03 Archaeplastida
GSVIVT01024179001 No alias Endoglucanase 24 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01037210001 No alias Cell wall.cellulose.degradation.endo-1,4-beta-glucanase 0.06 Archaeplastida
GSVIVT01037709001 No alias Endoglucanase 11 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_15573 No alias endo-1,4-beta-glucanase 0.04 Archaeplastida
Gb_26728 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_28546 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_29204 No alias Endoglucanase 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_29209 No alias Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Gb_34875 No alias Endoglucanase 4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os02g03120.1 No alias Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os02g50490.1 No alias Endoglucanase 7 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g57860.1 No alias Endoglucanase 13 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os06g50140.1 No alias Endoglucanase 18 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g32940.1 No alias Endoglucanase 21 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10241783g0010 No alias Endoglucanase 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10430095g0010 No alias Endoglucanase OS=Phaseolus vulgaris (sp|p22503|gun_phavu : 316.0) 0.03 Archaeplastida
MA_127108g0010 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_19509g0020 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_480961g0010 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_74652g0010 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_76986g0010 No alias Endoglucanase 17 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp2g26250.1 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Pp3c13_24600V3.1 No alias glycosyl hydrolase 9C2 0.03 Archaeplastida
Pp3c26_160V3.1 No alias glycosyl hydrolase 9C3 0.03 Archaeplastida
Pp3c3_27100V3.1 No alias cellulase 2 0.04 Archaeplastida
Smo77612 No alias Endoglucanase 2 OS=Arabidopsis thaliana 0.06 Archaeplastida
Solyc04g081300.4.1 No alias Endoglucanase 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g049300.3.1 No alias Endoglucanase 11 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc08g083210.3.1 No alias Endoglucanase 1 OS=Persea americana... 0.03 Archaeplastida
Solyc12g055970.3.1 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e013675_P001 No alias Endoglucanase 5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e023503_P001 No alias Endoglucanase 7 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e030964_P003 No alias Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e034821_P002 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e041926_P001 No alias Endoglucanase 13 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0010089 xylem development RCA Interproscan
BP GO:0044036 cell wall macromolecule metabolic process RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005372 water transmembrane transporter activity IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009650 UV protection IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
BP GO:0010015 root morphogenesis IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0015250 water channel activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0022622 root system development IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0046423 allene-oxide cyclase activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0051513 regulation of monopolar cell growth IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:2000012 regulation of auxin polar transport IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000122 negative regulation of stomatal complex development IEP Neighborhood
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 53 506
No external refs found!