1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp4g13890.1

Mp4g13890.1


Description : Putative F-box protein PP2-B12 OS=Arabidopsis thaliana (sp|q9flu7|p2b12_arath : 95.1)


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0072723 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g13890.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.03 Archaeplastida
AT2G02300 PP2-B5, AtPP2-B5 phloem protein 2-B5 0.02 Archaeplastida
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.03 Archaeplastida
LOC_Os01g06500.1 No alias Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g56820.1 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g03740.1 No alias F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10428882g0010 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429303g0020 No alias F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_413510g0010 No alias F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_6247508g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7604366g0010 No alias F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp1g08170.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp3g22930.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g083730.2.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
Solyc11g006740.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025828_P003 No alias Lectin OS=Luffa acutangula (sp|c0hjv2|lec_lufac : 129.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 352 509
IPR025886 PP2-like 87 243
No external refs found!