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Description : phenylalanine ammonia lyase (PAL)
Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp4g14110.1 | |
| Cluster | HCCA: Cluster_139 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00201680 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
| AMTR_s00024p00201930 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| AMTR_s00032p00159210 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | Archaeplastida | |
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.02 | Archaeplastida | |
| GSVIVT01006148001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| GSVIVT01015138001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01024292001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| GSVIVT01024293001 | No alias | Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... | 0.05 | Archaeplastida | |
| GSVIVT01024299001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01024303001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| GSVIVT01024305001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| GSVIVT01024306001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| GSVIVT01024315001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01025214001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01025703001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | Archaeplastida | |
| Gb_01672 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Gb_04830 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Gb_16672 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Gb_21115 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Gb_41796 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| LOC_Os02g41630.2 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| LOC_Os02g41650.3 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| LOC_Os02g41670.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| LOC_Os02g41680.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| LOC_Os04g43760.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| LOC_Os04g43800.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| LOC_Os05g35290.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| LOC_Os11g48110.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| MA_44561g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| MA_632036g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_73113g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Mp1g10150.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| Mp4g10060.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Pp3c13_9000V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
| Pp3c14_11870V3.1 | No alias | PHE ammonia lyase 1 | 0.04 | Archaeplastida | |
| Pp3c19_13690V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
| Pp3c1_18680V3.1 | No alias | phenyl alanine ammonia-lyase 3 | 0.03 | Archaeplastida | |
| Pp3c1_18830V3.1 | No alias | PHE ammonia lyase 1 | 0.03 | Archaeplastida | |
| Pp3c1_18940V3.1 | No alias | PHE ammonia lyase 1 | 0.03 | Archaeplastida | |
| Pp3c21_7670V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.02 | Archaeplastida | |
| Pp3c24_13110V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.02 | Archaeplastida | |
| Pp3c2_30610V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
| Solyc00g500095.1.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Solyc00g500353.1.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Solyc03g042560.3.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Solyc03g078280.3.1 | No alias | Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... | 0.04 | Archaeplastida | |
| Zm00001e005064_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Zm00001e007572_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Zm00001e007573_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Zm00001e015156_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Zm00001e023031_P002 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Zm00001e023033_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
| CC | GO:0000813 | ESCRT I complex | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005887 | integral component of plasma membrane | IEP | Neighborhood |
| BP | GO:0006801 | superoxide metabolic process | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| BP | GO:0006825 | copper ion transport | IEP | Neighborhood |
| BP | GO:0006826 | iron ion transport | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| CC | GO:0031226 | intrinsic component of plasma membrane | IEP | Neighborhood |
| BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | Neighborhood |
| CC | GO:0033573 | high-affinity iron permease complex | IEP | Neighborhood |
| BP | GO:0034220 | ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0035434 | copper ion transmembrane transport | IEP | Neighborhood |
| CC | GO:0036452 | ESCRT complex | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| CC | GO:0044440 | endosomal part | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | Neighborhood |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Neighborhood |
| BP | GO:0098655 | cation transmembrane transport | IEP | Neighborhood |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Neighborhood |
| CC | GO:1905862 | ferroxidase complex | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
| CC | GO:1990351 | transporter complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 79 | 550 |
| No external refs found! |