Mp4g23910.1

Description : component RPL27 of LSU proteome component

Gene families : OG0002403 (Archaeplastida) Phylogenetic Tree(s): OG0002403_tree ,
OG_05_0002938 (LandPlants) Phylogenetic Tree(s): OG_05_0002938_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp4g23910.1
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00176990	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.22	Archaeplastida
AMTR_s00045p00086530	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.12	Archaeplastida
AT2G32220	No alias	Ribosomal L27e protein family	0.03	Archaeplastida
AT3G22230	No alias	Ribosomal L27e protein family	0.38	Archaeplastida
AT4G15000	No alias	Ribosomal L27e protein family	0.49	Archaeplastida
Cpa\|evm.model.tig00021275.23	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.42	Archaeplastida
Cre17.g701650	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.42	Archaeplastida
GSVIVT01012080001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.11	Archaeplastida
GSVIVT01020410001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	Archaeplastida
Gb_34700	No alias	component RPL27 of LSU proteome component	0.02	Archaeplastida
Gb_36674	No alias	component RPL27 of LSU proteome component	0.24	Archaeplastida
LOC_Os02g18380.1	No alias	component RPL27 of LSU proteome component	0.07	Archaeplastida
LOC_Os10g41470.1	No alias	component RPL27 of LSU proteome component	0.09	Archaeplastida
MA_10034g0010	No alias	component RPL27 of LSU proteome component	0.04	Archaeplastida
MA_3390g0010	No alias	component RPL27 of LSU proteome component	0.24	Archaeplastida
Pp3c15_4610V3.1	No alias	Ribosomal L27e protein family	0.43	Archaeplastida
Pp3c23_21640V3.1	No alias	Ribosomal L27e protein family	0.01	Archaeplastida
Pp3c24_20290V3.1	No alias	Ribosomal L27e protein family	0.28	Archaeplastida
Pp3c8_24410V3.1	No alias	Ribosomal L27e protein family	0.31	Archaeplastida
Smo166700	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.19	Archaeplastida
Solyc06g073300.1.1	No alias	component RPL27 of LSU proteome component	0.32	Archaeplastida
Solyc07g043360.1.1	No alias	component RPL27 of LSU proteome component	0.13	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
MF	GO:0004129	cytochrome-c oxidase activity	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
CC	GO:0005740	mitochondrial envelope	IEP	Neighborhood
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
MF	GO:0008097	5S rRNA binding	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
BP	GO:0009555	pollen development	IEP	Neighborhood
MF	GO:0015002	heme-copper terminal oxidase activity	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	Neighborhood
MF	GO:0016676	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
CC	GO:0031967	organelle envelope	IEP	Neighborhood
CC	GO:0031975	envelope	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
BP	GO:0048229	gametophyte development	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001141	Ribosomal_L27e	52	135

External Links

No external refs found!

Mp4g23910.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation