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Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana (sp|o65451|fb333_arath : 148.0)
Gene families : OG0001122 (Archaeplastida) Phylogenetic Tree(s): OG0001122_tree ,
OG_05_0000683 (LandPlants) Phylogenetic Tree(s): OG_05_0000683_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp5g00910.1 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00044p00128640 | evm_27.TU.AmTr_v1... | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| AMTR_s00067p00091510 | evm_27.TU.AmTr_v1... | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| AMTR_s00085p00174790 | evm_27.TU.AmTr_v1... | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| LOC_Os02g13260.1 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| LOC_Os02g28590.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| LOC_Os12g01970.1 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.01 | Archaeplastida | |
| Mp5g01090.1 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Mp5g17910.1 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Solyc02g080850.1.1 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
| Zm00001e014444_P001 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Zm00001e024925_P001 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| MF | GO:0008061 | chitin binding | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027949 | Chloroplast_duf | 155 | 455 |
| No external refs found! |