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  5. Mp6g03260.1

Mp6g03260.1


Description : ER-associated protein (Reticulon)


Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g03260.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.69 No alias No description available 0.02 Archaeplastida
GSVIVT01019440001 No alias Reticulon-like protein B4 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01034020001 No alias Reticulon-like protein B12 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_10741 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
LOC_Os03g21840.1 No alias ER-associated protein (Reticulon) 0.06 Archaeplastida
LOC_Os03g56900.1 No alias ER-associated protein (Reticulon) 0.04 Archaeplastida
LOC_Os04g29920.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
LOC_Os05g24770.1 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
LOC_Os06g30750.1 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
Pp3c12_4500V3.1 No alias Reticulon family protein 0.02 Archaeplastida
Pp3c13_21070V3.1 No alias Reticulon family protein 0.03 Archaeplastida
Pp3c3_26340V3.1 No alias Reticulon family protein 0.02 Archaeplastida
Smo167511 No alias Reticulon-like protein B2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g095200.3.1 No alias ER-associated protein (Reticulon) 0.04 Archaeplastida
Solyc08g081730.4.1 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
Solyc09g055250.3.1 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
Solyc10g011870.3.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
Zm00001e019883_P002 No alias ER-associated protein (Reticulon) 0.01 Archaeplastida
Zm00001e029083_P001 No alias ER-associated protein (Reticulon) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 58 211
No external refs found!