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  5. AT4G10160

AT4G10160


Description : RING/U-box superfamily protein


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0003505 (LandPlants) Phylogenetic Tree(s): OG_05_0003505_tree ,
OG_06_0006937 (SeedPlants) Phylogenetic Tree(s): OG_06_0006937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10160
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G53820 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G19140 DNF RING/U-box superfamily protein 0.03 Archaeplastida
AT4G18110 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT5G41430 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G41450 No alias RING/U-box superfamily protein 0.07 Archaeplastida
Cpa|evm.model.tig00020943.22 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Cre01.g009101 No alias No description available 0.02 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01013145001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01037651001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_14821 No alias RHA2 signal transducer of abscisic acid perception 0.01 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g15080.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g29676.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g45060.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_17390g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_229590g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_393170g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5218469g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6475030g0010 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc01g100100.4.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc04g054370.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e023969_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0016567 protein ubiquitination IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Neighborhood
MF GO:0004150 dihydroneopterin aldolase activity IEP Neighborhood
MF GO:0009008 DNA-methyltransferase activity IEP Neighborhood
MF GO:0009824 AMP dimethylallyltransferase activity IEP Neighborhood
MF GO:0052622 ATP dimethylallyltransferase activity IEP Neighborhood
MF GO:0052623 ADP dimethylallyltransferase activity IEP Neighborhood
BP GO:0060688 regulation of morphogenesis of a branching structure IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900618 regulation of shoot system morphogenesis IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1905428 regulation of plant organ formation IEP Neighborhood
BP GO:2000032 regulation of secondary shoot formation IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 96 139
No external refs found!