AT4G11400

Description : ARID/BRIGHT DNA-binding domain;ELM2 domain protein

Gene families : OG0001021 (Archaeplastida) Phylogenetic Tree(s): OG0001021_tree ,
OG_05_0000687 (LandPlants) Phylogenetic Tree(s): OG_05_0000687_tree ,
OG_06_0001952 (SeedPlants) Phylogenetic Tree(s): OG_06_0001952_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G11400
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00212620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.ARID...	0.02	Archaeplastida
AT2G03470	No alias	ELM2 domain-containing protein	0.01	Archaeplastida
AT5G04110	GYRB3	DNA GYRASE B3	0.03	Archaeplastida
Pp3c18_4220V3.1	No alias	ARID/BRIGHT DNA-binding domain;ELM2 domain protein	0.02	Archaeplastida
Smo404859	No alias	AT-rich interactive domain-containing protein 2...	0.02	Archaeplastida
Solyc06g069560.3.1	No alias	AT-rich interactive domain-containing protein 2...	0.01	Archaeplastida
Solyc06g076740.3.1	No alias	AT-rich interactive domain-containing protein 2...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0009008	DNA-methyltransferase activity	IEP	Neighborhood
MF	GO:0009824	AMP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0052622	ATP dimethylallyltransferase activity	IEP	Neighborhood
MF	GO:0052623	ADP dimethylallyltransferase activity	IEP	Neighborhood
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1900618	regulation of shoot system morphogenesis	IEP	Neighborhood
BP	GO:1905428	regulation of plant organ formation	IEP	Neighborhood
BP	GO:2000032	regulation of secondary shoot formation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001606	ARID_dom	29	109

External Links

No external refs found!