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  5. AT4G12050

AT4G12050


Description : Predicted AT-hook DNA-binding family protein


Gene families : OG0000411 (Archaeplastida) Phylogenetic Tree(s): OG0000411_tree ,
OG_05_0000205 (LandPlants) Phylogenetic Tree(s): OG_05_0000205_tree ,
OG_06_0041561 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G12050
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00189120 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 20... 0.04 Archaeplastida
AMTR_s00041p00025000 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 24... 0.04 Archaeplastida
AMTR_s00149p00093420 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 23... 0.03 Archaeplastida
AT4G14465 AHL20 AT-hook motif nuclear-localized protein 20 0.03 Archaeplastida
GSVIVT01013202001 No alias AT-hook motif nuclear-localized protein 23... 0.04 Archaeplastida
GSVIVT01016497001 No alias AT-hook motif nuclear-localized protein 15... 0.03 Archaeplastida
GSVIVT01019932001 No alias AT-hook motif nuclear-localized protein 24... 0.04 Archaeplastida
GSVIVT01036210001 No alias AT-hook motif nuclear-localized protein 19... 0.03 Archaeplastida
Gb_34320 No alias AT-hook motif nuclear-localized protein 24... 0.03 Archaeplastida
LOC_Os02g25020.1 No alias AT-hook motif nuclear-localized protein 22... 0.05 Archaeplastida
LOC_Os03g16350.1 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
LOC_Os04g50030.1 No alias AT-hook motif nuclear-localized protein 23... 0.06 Archaeplastida
LOC_Os06g04540.1 No alias AT-hook motif nuclear-localized protein 24... 0.03 Archaeplastida
LOC_Os06g22100.2 No alias AT-hook motif nuclear-localized protein 24... 0.03 Archaeplastida
LOC_Os08g06320.1 No alias AT-hook motif nuclear-localized protein 23... 0.08 Archaeplastida
LOC_Os08g44910.1 No alias AT-hook motif nuclear-localized protein 20... 0.05 Archaeplastida
MA_5409554g0010 No alias No annotation 0.04 Archaeplastida
MA_90407g0010 No alias AT-hook motif nuclear-localized protein 22... 0.01 Archaeplastida
Pp3c2_3980V3.1 No alias Predicted AT-hook DNA-binding family protein 0.03 Archaeplastida
Smo404546 No alias AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
Smo57074 No alias AT-hook motif nuclear-localized protein 22... 0.04 Archaeplastida
Smo71342 No alias AT-hook motif nuclear-localized protein 23... 0.02 Archaeplastida
Solyc01g091470.3.1 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
Solyc06g060500.1.1 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
Solyc07g056300.1.1 No alias AT-hook motif nuclear-localized protein 16... 0.05 Archaeplastida
Solyc08g007560.3.1 No alias AT-hook motif nuclear-localized protein 22... 0.07 Archaeplastida
Solyc08g077010.1.1 No alias AT-hook motif nuclear-localized protein 23... 0.04 Archaeplastida
Solyc08g079720.3.1 No alias AT-hook motif nuclear-localized protein 22... 0.08 Archaeplastida
Solyc09g089620.1.1 No alias AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
Solyc11g006090.3.1 No alias AT-hook motif nuclear-localized protein 19... 0.03 Archaeplastida
Solyc12g087950.1.1 No alias AT-hook motif nuclear-localized protein 17... 0.02 Archaeplastida
Zm00001e007105_P001 No alias AT-hook motif nuclear-localized protein 23... 0.05 Archaeplastida
Zm00001e024863_P001 No alias AT-hook motif nuclear-localized protein 23... 0.05 Archaeplastida
Zm00001e036953_P001 No alias AT-hook motif nuclear-localized protein 21... 0.03 Archaeplastida
Zm00001e041402_P001 No alias AT-hook motif nuclear-localized protein 21... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
CC GO:0000323 lytic vacuole IEP Neighborhood
MF GO:0003680 AT DNA binding IEP Neighborhood
MF GO:0003838 sterol 24-C-methyltransferase activity IEP Neighborhood
MF GO:0004013 adenosylhomocysteinase activity IEP Neighborhood
MF GO:0004040 amidase activity IEP Neighborhood
MF GO:0004311 farnesyltranstransferase activity IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
MF GO:0004452 isopentenyl-diphosphate delta-isomerase activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004791 thioredoxin-disulfide reductase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0008169 C-methyltransferase activity IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
MF GO:0008446 GDP-mannose 4,6-dehydratase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009647 skotomorphogenesis IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009749 response to glucose IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Neighborhood
CC GO:0009925 basal plasma membrane IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010065 primary meristem tissue development IEP Neighborhood
BP GO:0010067 procambium histogenesis IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
BP GO:0010453 regulation of cell fate commitment IEP Neighborhood
BP GO:0010455 positive regulation of cell fate commitment IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
BP GO:0016131 brassinosteroid metabolic process IEP Neighborhood
BP GO:0016132 brassinosteroid biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Neighborhood
MF GO:0016802 trialkylsulfonium hydrolase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
MF GO:0019137 thioglucosidase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
BP GO:0042964 thioredoxin reduction IEP Neighborhood
BP GO:0044070 regulation of anion transport IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0045165 cell fate commitment IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0045597 positive regulation of cell differentiation IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0048766 root hair initiation IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
CC GO:0071944 cell periphery IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1903959 regulation of anion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 146 260
No external refs found!