1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G12340

AT4G12340


Description : copper ion binding


Gene families : OG0006213 (Archaeplastida) Phylogenetic Tree(s): OG0006213_tree ,
OG_05_0006875 (LandPlants) Phylogenetic Tree(s): OG_05_0006875_tree ,
OG_06_0007544 (SeedPlants) Phylogenetic Tree(s): OG_06_0007544_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G12340
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Pp3c8_11610V3.1 No alias copper ion binding 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000104 succinate dehydrogenase activity IEP Neighborhood
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004300 enoyl-CoA hydratase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004792 thiosulfate sulfurtransferase activity IEP Neighborhood
CC GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006121 mitochondrial electron transport, succinate to ubiquinone IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016783 sulfurtransferase activity IEP Neighborhood
MF GO:0016784 3-mercaptopyruvate sulfurtransferase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0042631 cellular response to water deprivation IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0045257 succinate dehydrogenase complex (ubiquinone) IEP Neighborhood
CC GO:0045281 succinate dehydrogenase complex IEP Neighborhood
CC GO:0045283 fumarate reductase complex IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0051750 delta3,5-delta2,4-dienoyl-CoA isomerase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071229 cellular response to acid chemical IEP Neighborhood
BP GO:0071462 cellular response to water stimulus IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!