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  5. AT4G13965

AT4G13965


Description : Protein with RNI-like/FBD-like domains


Gene families : OG0001094 (Archaeplastida) Phylogenetic Tree(s): OG0001094_tree ,
OG_05_0000663 (LandPlants) Phylogenetic Tree(s): OG_05_0000663_tree ,
OG_06_0000324 (SeedPlants) Phylogenetic Tree(s): OG_06_0000324_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G13965
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT1G05080 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT1G32375 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 Archaeplastida
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT1G55030 No alias RNI-like superfamily protein 0.06 Archaeplastida
AT3G10750 No alias FBD domain family 0.06 Archaeplastida
AT3G49020 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.06 Archaeplastida
AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.08 Archaeplastida
AT3G49040 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G49045 No alias No description available 0.03 Archaeplastida
AT3G49480 No alias Protein with RNI-like/FBD-like domains 0.02 Archaeplastida
AT4G00160 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT4G26340 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT5G38570 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT5G38590 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT5G40750 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 Archaeplastida
AT5G44850 No alias Protein with RNI-like/FBD-like domains 0.1 Archaeplastida
AT5G52460 EDA41 FBD, F-box and Leucine Rich Repeat domains containing protein 0.06 Archaeplastida
AT5G56325 No alias FBD-like domain family protein 0.06 Archaeplastida
AT5G56370 No alias F-box/RNI-like/FBD-like domains-containing protein 0.15 Archaeplastida
AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.07 Archaeplastida
AT5G56410 No alias Protein with RNI-like/FBD-like domains 0.05 Archaeplastida
AT5G56430 No alias F-box/FBD-like domains containing protein 0.09 Archaeplastida
AT5G56440 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT5G56452 No alias FBD-like domain family protein 0.05 Archaeplastida
AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.07 Archaeplastida
AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.06 Archaeplastida
AT5G56700 No alias FBD / Leucine Rich Repeat domains containing protein 0.02 Archaeplastida
AT5G56810 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G56820 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT5G62970 No alias Protein with RNI-like/FBD-like domains 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005673 transcription factor TFIIE complex IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0048653 anther development IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 109 134
IPR006566 FBD 301 344
No external refs found!