Pp3c10_11910V3.1

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c10_11910V3.1
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G46768	RAP2.1	related to AP2 1	0.03	Archaeplastida
AT1G64380	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G20880	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.02	Archaeplastida
AT4G28140	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G47230	ERF5, ATERF-5, ATERF5	ethylene responsive element binding factor 5	0.03	Archaeplastida
GSVIVT01010629001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Gb_08541	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g09650.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g29810.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g07030.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g47590.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_19420g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_94228g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Pp3c25_4250V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Solyc03g095977.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g123500.4.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g050750.2.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc05g052410.3.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc06g051840.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g066540.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc08g066660.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc12g005960.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e007351_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e020274_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e036260_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e036401_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003951	NAD+ kinase activity	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006739	NADP metabolic process	IEP	Neighborhood
BP	GO:0006741	NADP biosynthetic process	IEP	Neighborhood
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0009108	coenzyme biosynthetic process	IEP	Neighborhood
BP	GO:0009117	nucleotide metabolic process	IEP	Neighborhood
BP	GO:0009165	nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Neighborhood
BP	GO:0051186	cofactor metabolic process	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0090407	organophosphate biosynthetic process	IEP	Neighborhood
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	122	171

External Links

No external refs found!

Pp3c10_11910V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation