Pp3c10_20380V3.1


Description : proteolysis 6


Gene families : OG0002611 (Archaeplastida) Phylogenetic Tree(s): OG0002611_tree ,
OG_05_0004097 (LandPlants) Phylogenetic Tree(s): OG_05_0004097_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_20380V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00210330 evm_27.TU.AmTr_v1... Protein degradation.N-end rule pathway of targeted... 0.02 Archaeplastida
AT5G02310 PRT6 proteolysis 6 0.14 Archaeplastida
Cpa|evm.model.tig00001107.13 No alias Protein degradation.N-end rule pathway of targeted... 0.01 Archaeplastida
Cre02.g089237 No alias Protein degradation.N-end rule pathway of targeted... 0.03 Archaeplastida
GSVIVT01034167001 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana 0.09 Archaeplastida
GSVIVT01034169001 No alias Protein degradation.N-end rule pathway of targeted... 0.06 Archaeplastida
Gb_11947 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.07 Archaeplastida
LOC_Os01g05500.2 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.07 Archaeplastida
MA_10429079g0010 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_10429118g0010 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.09 Archaeplastida
MA_387g0010 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.06 Archaeplastida
MA_767141g0010 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp7g16320.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.1 Archaeplastida
Pp3c9_4700V3.1 No alias proteolysis 6 0.03 Archaeplastida
Smo438209 No alias Protein degradation.N-end rule pathway of targeted... 0.07 Archaeplastida
Solyc09g010830.4.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.03 Archaeplastida
Zm00001e016914_P004 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!