1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c10_25280V3.1

Pp3c10_25280V3.1


Description : DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases


Gene families : OG0007221 (Archaeplastida) Phylogenetic Tree(s): OG0007221_tree ,
OG_05_0005184 (LandPlants) Phylogenetic Tree(s): OG_05_0005184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_25280V3.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_11570V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 Archaeplastida
Pp3c11_13900V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 Archaeplastida
Pp3c11_14490V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.02 Archaeplastida
Pp3c13_14630V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.05 Archaeplastida
Pp3c14_3980V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 Archaeplastida
Pp3c15_13750V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.06 Archaeplastida
Pp3c16_17860V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c16_6050V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 Archaeplastida
Pp3c1_290V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.05 Archaeplastida
Pp3c25_2990V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c2_18826V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida
Pp3c2_390V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.02 Archaeplastida
Pp3c3_18830V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 Archaeplastida
Pp3c4_24900V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c6_15720V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.02 Archaeplastida
Pp3c9_12701V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006313 transposition, DNA-mediated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032196 transposition IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR006134 DNA-dir_DNA_pol_B_multi_dom 323 692
IPR006133 DNA-dir_DNA_pol_B_exonuc 22 247
No external refs found!