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  5. Pp3c11_23580V3.1

Pp3c11_23580V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0002803 (Archaeplastida) Phylogenetic Tree(s): OG0002803_tree ,
OG_05_0002539 (LandPlants) Phylogenetic Tree(s): OG_05_0002539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_23580V3.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT3G19590 BUB3.1 Transducin/WD40 repeat-like superfamily protein 0.06 Archaeplastida
GSVIVT01037848001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.02 Archaeplastida
Gb_11729 No alias BUB3 spindle assembly checkpoint protein 0.05 Archaeplastida
LOC_Os03g55140.1 No alias Mitotic checkpoint protein BUB3.3 OS=Arabidopsis... 0.07 Archaeplastida
MA_9077232g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g09140.1 No alias BUB3 spindle assembly checkpoint protein 0.03 Archaeplastida
Smo146851 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.02 Archaeplastida
Solyc01g107160.3.1 No alias BUB3 spindle assembly checkpoint protein 0.02 Archaeplastida
Zm00001e005741_P003 No alias BUB3 spindle assembly checkpoint protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!