Coexpression cluster: Cluster_6 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044427 chromosomal part 3.74% (8/214) 5.29 0.0 0.0
GO:0044815 DNA packaging complex 3.74% (8/214) 5.39 0.0 0.0
GO:0032993 protein-DNA complex 3.27% (7/214) 5.19 0.0 0.0
GO:0000786 nucleosome 3.27% (7/214) 5.24 0.0 0.0
GO:0044446 intracellular organelle part 5.14% (11/214) 3.65 0.0 0.0
GO:0044422 organelle part 5.14% (11/214) 3.65 0.0 0.0
GO:0005575 cellular_component 7.94% (17/214) 1.8 9e-06 0.000323
GO:0044424 intracellular part 6.54% (14/214) 1.99 1.4e-05 0.000434
GO:0044464 cell part 6.54% (14/214) 1.97 1.7e-05 0.000454
GO:0003677 DNA binding 3.74% (8/214) 2.66 4.4e-05 0.001083
GO:0032991 protein-containing complex 5.14% (11/214) 1.87 0.000243 0.005446
GO:0003676 nucleic acid binding 4.67% (10/214) 1.91 0.000379 0.007796
GO:0005789 endoplasmic reticulum membrane 0.93% (2/214) 5.66 0.000638 0.012118
GO:1901363 heterocyclic compound binding 7.01% (15/214) 1.37 0.000779 0.01282
GO:0097159 organic cyclic compound binding 7.01% (15/214) 1.37 0.000779 0.01282
GO:0006397 mRNA processing 0.93% (2/214) 5.07 0.001511 0.021952
GO:0016071 mRNA metabolic process 0.93% (2/214) 5.07 0.001511 0.021952
GO:0005488 binding 8.41% (18/214) 1.07 0.002598 0.035657
GO:0005839 proteasome core complex 0.93% (2/214) 4.0 0.006872 0.047149
GO:0044432 endoplasmic reticulum part 0.93% (2/214) 4.0 0.006872 0.047149
GO:0004298 threonine-type endopeptidase activity 0.93% (2/214) 4.0 0.006872 0.047149
GO:0070003 threonine-type peptidase activity 0.93% (2/214) 4.0 0.006872 0.047149
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_57 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_58 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_110 0.082 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_40 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_44 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_60 0.051 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_120 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_137 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_158 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_24 0.045 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_22 0.079 Archaeplastida Compare
Gingko biloba HCCA Cluster_188 0.045 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_29 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_108 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.063 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_277 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_346 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_3 0.092 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_20 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.035 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_100 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_149 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_3 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_48 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_184 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_169 0.044 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.046 Archaeplastida Compare
Picea abies HCCA Cluster_199 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_202 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_329 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_335 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_423 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_87 0.061 Archaeplastida Compare
Oryza sativa HCCA Cluster_164 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.044 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_310 0.033 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_29 0.031 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.039 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_120 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_266 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_281 0.039 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.098 Archaeplastida Compare
Vitis vinifera HCCA Cluster_111 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_186 0.045 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.042 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_110 0.021 Archaeplastida Compare
Sequences (214) (download table)

InterPro Domains

GO Terms

Family Terms