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  5. Pp3c11_26710V3.1

Pp3c11_26710V3.1


Description : ARM repeat superfamily protein


Gene families : OG0001870 (Archaeplastida) Phylogenetic Tree(s): OG0001870_tree ,
OG_05_0001719 (LandPlants) Phylogenetic Tree(s): OG_05_0001719_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_26710V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT3G08943 No alias ARM repeat superfamily protein 0.09 Archaeplastida
AT5G53480 No alias ARM repeat superfamily protein 0.02 Archaeplastida
Cre01.g034000 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.06 Archaeplastida
GSVIVT01030311001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
GSVIVT01038575001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 Archaeplastida
Gb_04236 No alias IMB1 nucleocytoplasmic import karyopherin 0.04 Archaeplastida
Gb_35028 No alias IMB1 nucleocytoplasmic import karyopherin 0.03 Archaeplastida
LOC_Os05g28510.4 No alias IMB1 nucleocytoplasmic import karyopherin 0.02 Archaeplastida
MA_12771g0010 No alias IMB1 nucleocytoplasmic import karyopherin 0.05 Archaeplastida
MA_34778g0010 No alias IMB1 nucleocytoplasmic import karyopherin 0.02 Archaeplastida
Smo124593 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 Archaeplastida
Smo185511 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Solyc03g082940.3.1 No alias IMB1 nucleocytoplasmic import karyopherin 0.03 Archaeplastida
Solyc06g052030.3.1 No alias IMB1 nucleocytoplasmic import karyopherin 0.06 Archaeplastida
Solyc09g005010.4.1 No alias IMB1 nucleocytoplasmic import karyopherin 0.03 Archaeplastida
Zm00001e002934_P001 No alias IMB1 nucleocytoplasmic import karyopherin 0.07 Archaeplastida
Zm00001e018172_P001 No alias IMB1 nucleocytoplasmic import karyopherin 0.05 Archaeplastida
Zm00001e031516_P001 No alias IMB1 nucleocytoplasmic import karyopherin 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0008536 Ran GTPase binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 23 102
No external refs found!